From 0b87536d9145b81e4ac644a558a88ec2206dd62a Mon Sep 17 00:00:00 2001 From: Andreas Huber Date: Sat, 19 Sep 2020 19:00:56 +0200 Subject: [PATCH 01/18] update libraries --- build.gradle | 14 +++++++------- pdb-ui/build.gradle | 1 + 2 files changed, 8 insertions(+), 7 deletions(-) diff --git a/build.gradle b/build.gradle index d10b2c4..036a2e8 100644 --- a/build.gradle +++ b/build.gradle @@ -14,23 +14,23 @@ buildscript { dependencies { // usage: gradlew dependencyUpdates -Drevision=release - classpath 'com.github.ben-manes:gradle-versions-plugin:0.29.0' + classpath 'com.github.ben-manes:gradle-versions-plugin:0.33.0' } } ext { - javaVersion=12 + javaVersion=14 version_log4j2= '2.13.3' // keep in sync with spring-boot-starter-log4j2 - version_spring = '2.3.2.RELEASE' - version_junit = '5.6.1' - version_junit_platform = '1.6.1' + version_spring = '2.3.4.RELEASE' + version_junit = '5.7.0' + version_junit_platform = '1.7.0' lib_antlr = "org.antlr:antlr4:4.8-1" lib_commons_collections4 = 'org.apache.commons:commons-collections4:4.4' - lib_commons_lang3 = 'org.apache.commons:commons-lang3:3.10' + lib_commons_lang3 = 'org.apache.commons:commons-lang3:3.11' lib_jackson_databind = 'com.fasterxml.jackson.core:jackson-databind:2.11.2' lib_log4j2_core = "org.apache.logging.log4j:log4j-core:${version_log4j2}" @@ -92,7 +92,7 @@ subprojects { // dependencies that all sub-projects have dependencies { - testImplementation "org.junit.jupiter:junit-jupiter-engine:${version_junit}" + testImplementation("org.junit.jupiter:junit-jupiter-engine:${version_junit}") testImplementation "org.junit.jupiter:junit-jupiter-params:${version_junit}" // for @ParameterizedTest testImplementation "org.junit.platform:junit-platform-launcher:${version_junit_platform}" // needed by eclipse } diff --git a/pdb-ui/build.gradle b/pdb-ui/build.gradle index 79c40a1..9a99013 100644 --- a/pdb-ui/build.gradle +++ b/pdb-ui/build.gradle @@ -26,6 +26,7 @@ dependencies { testImplementation(lib_spring_boot_test){ exclude module: 'spring-boot-starter-logging' exclude module: 'junit' + exclude module: 'junit-vintage-engine' } } From c4ae1c431beea68b27fc4d861d5b1d4488a5ec06 Mon Sep 17 00:00:00 2001 From: Andreas Huber Date: Sat, 19 Sep 2020 19:03:57 +0200 Subject: [PATCH 02/18] add test for a date pattern without the 'T' --- .../java/org/lucares/pdbui/date/FastISODateParserTest.java | 6 +++--- 1 file changed, 3 insertions(+), 3 deletions(-) diff --git a/pdb-ui/src/test/java/org/lucares/pdbui/date/FastISODateParserTest.java b/pdb-ui/src/test/java/org/lucares/pdbui/date/FastISODateParserTest.java index 2804e58..dc65501 100644 --- a/pdb-ui/src/test/java/org/lucares/pdbui/date/FastISODateParserTest.java +++ b/pdb-ui/src/test/java/org/lucares/pdbui/date/FastISODateParserTest.java @@ -44,8 +44,7 @@ public class FastISODateParserTest { Arguments.of("2018-11-18T14:55:49.Z"), // Arguments.of("2018-11-18T14:55:49.-01:23"), // Arguments.of("2018-11-18T14:55:49Z"), // - Arguments.of("2018-11-18T14:55:49-01:23"), // - Arguments.of("2018-11-18 14:55:49,123") // + Arguments.of("2018-11-18T14:55:49-01:23") // ); } @@ -76,7 +75,8 @@ public class FastISODateParserTest { Arguments.of("2018-11-18T14:42:49,123+12:34", "2018-11-18T14:42:49.123+12:34"), // with comma instead of // dot Arguments.of("2018-11-18T14:42:49.123", "2018-11-18T14:42:49.123Z"), // without timezone - Arguments.of("2018-11-18T14:42:49,123", "2018-11-18T14:42:49.123Z") // with command, without timezone + Arguments.of("2018-11-18T14:42:49,123", "2018-11-18T14:42:49.123Z"), // with command, without timezone + Arguments.of("2018-11-18 14:42:49,123", "2018-11-18T14:42:49.123Z") // without the 'T' ); } From 6755411a5d9ca05740fd11ea44b8a0c27089a933 Mon Sep 17 00:00:00 2001 From: Andreas Huber Date: Sat, 19 Sep 2020 19:09:56 +0200 Subject: [PATCH 03/18] update JS libraries --- pdb-js/package-lock.json | 3077 +++++++++++++++----------------------- pdb-js/package.json | 38 +- 2 files changed, 1221 insertions(+), 1894 deletions(-) diff --git a/pdb-js/package-lock.json b/pdb-js/package-lock.json index 4818130..9f629f4 100644 --- a/pdb-js/package-lock.json +++ b/pdb-js/package-lock.json @@ -5,25 +5,42 @@ "requires": true, "dependencies": { "@angular-devkit/architect": { - 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"serialize-javascript": "^3.1.0", + "serialize-javascript": "^4.0.0", "source-map": "^0.6.1", "terser": "^4.1.2", "webpack-sources": "^1.4.0", "worker-farm": "^1.7.0" } + }, + "to-regex-range": { + "version": "2.1.1", + "resolved": "https://registry.npmjs.org/to-regex-range/-/to-regex-range-2.1.1.tgz", + "integrity": "sha1-fIDBe53+vlmeJzZ+DU3VWQFB2zg=", + "dev": true, + "requires": { + "is-number": "^3.0.0", + "repeat-string": "^1.6.1" + } } } }, @@ -14369,6 +13642,17 @@ "snapdragon-node": "^2.0.1", "split-string": "^3.0.2", "to-regex": "^3.0.1" + }, + "dependencies": { + "extend-shallow": { + "version": "2.0.1", + "resolved": "https://registry.npmjs.org/extend-shallow/-/extend-shallow-2.0.1.tgz", + "integrity": "sha1-Ua99YUrZqfYQ6huvu5idaxxWiQ8=", + "dev": true, + "requires": { + "is-extendable": "^0.1.0" + } + } } }, "chokidar": { @@ -14391,15 +13675,6 @@ "upath": "^1.1.1" } }, - "extend-shallow": { - "version": "2.0.1", - "resolved": "https://registry.npmjs.org/extend-shallow/-/extend-shallow-2.0.1.tgz", - "integrity": "sha1-Ua99YUrZqfYQ6huvu5idaxxWiQ8=", - "dev": true, - "requires": { - "is-extendable": "^0.1.0" - } - }, "fill-range": { "version": "4.0.0", "resolved": "https://registry.npmjs.org/fill-range/-/fill-range-4.0.0.tgz", @@ -14410,6 +13685,17 @@ "is-number": "^3.0.0", "repeat-string": "^1.6.1", "to-regex-range": "^2.1.0" + }, + "dependencies": { + "extend-shallow": { + "version": "2.0.1", + "resolved": "https://registry.npmjs.org/extend-shallow/-/extend-shallow-2.0.1.tgz", + "integrity": "sha1-Ua99YUrZqfYQ6huvu5idaxxWiQ8=", + "dev": true, + "requires": { + "is-extendable": "^0.1.0" + } + } } }, "fsevents": { @@ -14417,9 +13703,27 @@ "resolved": "https://registry.npmjs.org/fsevents/-/fsevents-1.2.13.tgz", "integrity": "sha512-oWb1Z6mkHIskLzEJ/XWX0srkpkTQ7vaopMQkyaEIoq0fmtFVxOthb8cCxeT+p3ynTdkk/RZwbgG4brR5BeWECw==", "dev": true, - "optional": true, + "optional": true + }, + "glob-parent": { + "version": "3.1.0", + "resolved": "https://registry.npmjs.org/glob-parent/-/glob-parent-3.1.0.tgz", + "integrity": "sha1-nmr2KZ2NO9K9QEMIMr0RPfkGxa4=", + "dev": true, "requires": { - "nan": "^2.12.1" + "is-glob": "^3.1.0", + "path-dirname": "^1.0.0" + }, + "dependencies": { + "is-glob": { + "version": "3.1.0", + "resolved": "https://registry.npmjs.org/is-glob/-/is-glob-3.1.0.tgz", + "integrity": "sha1-e6WuJCF4BKxwcHuWkiVnSGzD6Eo=", + "dev": true, + "requires": { + "is-extglob": "^2.1.0" + } + } } }, "is-absolute-url": { @@ -14444,15 +13748,38 @@ "dev": true, "requires": { "kind-of": "^3.0.2" + }, + "dependencies": { + "kind-of": { + "version": "3.2.2", + "resolved": "https://registry.npmjs.org/kind-of/-/kind-of-3.2.2.tgz", + "integrity": "sha1-MeohpzS6ubuw8yRm2JOupR5KPGQ=", + "dev": true, + "requires": { + "is-buffer": "^1.1.5" + } + } } }, - "kind-of": { - "version": "3.2.2", - "resolved": "https://registry.npmjs.org/kind-of/-/kind-of-3.2.2.tgz", - "integrity": "sha1-MeohpzS6ubuw8yRm2JOupR5KPGQ=", + "micromatch": { + "version": "3.1.10", + "resolved": "https://registry.npmjs.org/micromatch/-/micromatch-3.1.10.tgz", + "integrity": "sha512-MWikgl9n9M3w+bpsY3He8L+w9eF9338xRl8IAO5viDizwSzziFEyUzo2xrrloB64ADbTf8uA8vRqqttDTOmccg==", "dev": true, "requires": { - "is-buffer": "^1.1.5" + "arr-diff": "^4.0.0", + "array-unique": "^0.3.2", + "braces": "^2.3.1", + "define-property": "^2.0.2", + "extend-shallow": "^3.0.2", + "extglob": "^2.0.4", + "fragment-cache": "^0.2.1", + "kind-of": "^6.0.2", + "nanomatch": "^1.2.9", + "object.pick": "^1.3.0", + "regex-not": "^1.0.0", + "snapdragon": "^0.8.1", + "to-regex": "^3.0.2" } }, "readdirp": { @@ -14566,14 +13893,14 @@ "dev": true }, "whatwg-url": { - "version": "8.1.0", - "resolved": "https://registry.npmjs.org/whatwg-url/-/whatwg-url-8.1.0.tgz", - "integrity": "sha512-vEIkwNi9Hqt4TV9RdnaBPNt+E2Sgmo3gePebCRgZ1R7g6d23+53zCTnuB0amKI4AXq6VM8jj2DUAa0S1vjJxkw==", + "version": "8.2.2", + "resolved": "https://registry.npmjs.org/whatwg-url/-/whatwg-url-8.2.2.tgz", + "integrity": "sha512-PcVnO6NiewhkmzV0qn7A+UZ9Xx4maNTI+O+TShmfE4pqjoCMwUMjkvoNhNHPTvgR7QH9Xt3R13iHuWy2sToFxQ==", "dev": true, "requires": { "lodash.sortby": "^4.7.0", "tr46": "^2.0.2", - "webidl-conversions": "^5.0.0" + "webidl-conversions": "^6.1.0" } }, "when": { diff --git a/pdb-js/package.json b/pdb-js/package.json index e06495b..439b095 100644 --- a/pdb-js/package.json +++ b/pdb-js/package.json @@ -12,30 +12,30 @@ }, "private": true, "dependencies": { - "@angular/animations": "^10.0.8", - "@angular/cdk": "^10.1.3", - "@angular/common": "^10.0.8", - "@angular/compiler": "^10.0.8", - "@angular/core": "^10.0.8", - "@angular/forms": "^10.0.8", - "@angular/material": "^10.1.3", - "@angular/platform-browser": "^10.0.8", - "@angular/platform-browser-dynamic": "^10.0.8", - "@angular/router": "^10.0.8", - "moment": "^2.27.0", - "rxjs": "^6.5.5", - "rxjs-compat": "^6.5.5", + "@angular/animations": "^10.1.2", + "@angular/cdk": "^10.2.1", + "@angular/common": "^10.1.2", + "@angular/compiler": "^10.1.2", + "@angular/core": "^10.1.2", + "@angular/forms": "^10.1.2", + "@angular/material": "^10.2.1", + "@angular/platform-browser": "^10.1.2", + "@angular/platform-browser-dynamic": "^10.1.2", + "@angular/router": "^10.1.2", + "moment": "^2.28.0", + "rxjs": "^6.6.3", + "rxjs-compat": "^6.6.3", "tslib": "^2.0.0", "zone.js": "~0.10.2" }, "devDependencies": { - "@angular-devkit/build-angular": "^0.1000.5", - "@angular/cli": "^10.0.5", - "@angular/compiler-cli": "^10.0.8", - "@angular/language-service": "^10.0.8", - "@types/jasmine": "^3.5.10", + "@angular-devkit/build-angular": "^0.1000.8", + "@angular/cli": "^10.1.2", + "@angular/compiler-cli": "^10.1.2", + "@angular/language-service": "^10.1.2", + "@types/jasmine": "^3.5.14", "@types/jasminewd2": "~2.0.8", - "@types/node": "^12.12.47", + "@types/node": "^12.12.62", "codelyzer": "^6.0.0", "jasmine-core": "~3.5.0", "jasmine-spec-reporter": "~5.0.0", From e06f4175a3ae2ae38107c11350ddc3caf914a9ec Mon Sep 17 00:00:00 2001 From: Andreas Huber Date: Sun, 20 Sep 2020 09:11:45 +0200 Subject: [PATCH 04/18] illegal state exception when using interval 'year' --- .../src/main/java/org/lucares/utils/StartOfInterval.java | 4 ++++ 1 file changed, 4 insertions(+) diff --git a/pdb-utils/src/main/java/org/lucares/utils/StartOfInterval.java b/pdb-utils/src/main/java/org/lucares/utils/StartOfInterval.java index 63e82ab..f88f033 100644 --- a/pdb-utils/src/main/java/org/lucares/utils/StartOfInterval.java +++ b/pdb-utils/src/main/java/org/lucares/utils/StartOfInterval.java @@ -56,6 +56,10 @@ public class StartOfInterval implements TemporalAdjuster { result = result.with(ChronoField.DAY_OF_MONTH, 1); break; } + case YEARS: { + result = result.with(ChronoField.MONTH_OF_YEAR, 1); + break; + } default: throw new IllegalArgumentException("Unexpected value: " + unit); } From d26cd4138ed4fedd6c3333678fc68ba8437b394e Mon Sep 17 00:00:00 2001 From: Andreas Huber Date: Sun, 20 Sep 2020 09:12:10 +0200 Subject: [PATCH 05/18] add line break for labels of bar charts --- .../src/main/java/org/lucares/pdb/plot/api/Interval.java | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/pdb-plotting/src/main/java/org/lucares/pdb/plot/api/Interval.java b/pdb-plotting/src/main/java/org/lucares/pdb/plot/api/Interval.java index ba83834..f4dffa9 100644 --- a/pdb-plotting/src/main/java/org/lucares/pdb/plot/api/Interval.java +++ b/pdb-plotting/src/main/java/org/lucares/pdb/plot/api/Interval.java @@ -62,9 +62,9 @@ public class Interval { private String toDateFormatForBucketer(final IntervalTimeUnit intervalTimeUnit) { switch (intervalTimeUnit) { case MINUTE: - return "yyyy-MM-dd HH:mm"; + return "yyyy-MM-dd'\\n'HH:mm"; case HOUR: - return "yyyy-MM-dd HH"; + return "yyyy-MM-dd'\\n'HH:00"; case DAY: return "yyyy-MM-dd"; case WEEK: From 70430eb1fda31596a818d57cc7814098844dcafd Mon Sep 17 00:00:00 2001 From: Andreas Huber Date: Sun, 20 Sep 2020 09:13:42 +0200 Subject: [PATCH 06/18] missing locale in String.format() --- .../main/java/org/lucares/pdb/plot/api/BarChartAggregator.java | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/pdb-plotting/src/main/java/org/lucares/pdb/plot/api/BarChartAggregator.java b/pdb-plotting/src/main/java/org/lucares/pdb/plot/api/BarChartAggregator.java index d2132d8..447b8e6 100644 --- a/pdb-plotting/src/main/java/org/lucares/pdb/plot/api/BarChartAggregator.java +++ b/pdb-plotting/src/main/java/org/lucares/pdb/plot/api/BarChartAggregator.java @@ -82,7 +82,7 @@ public class BarChartAggregator implements CustomAggregator, IndexedAggregator, @Override public String renderLabels(final GnuplotAxis xAxis) { - return String.format("set label at %s %f, %d '%s' center front offset 0,0.3", // front + return String.format(Locale.US, "set label at %s %f, %d '%s' center front offset 0,0.3", // front xAxis == GnuplotAxis.X1 ? "first" : "second", // getIndex() + 0.5, // getCount(), // From 69f12aba9824439e951f8f19febc8b925efcebae Mon Sep 17 00:00:00 2001 From: Andreas Huber Date: Sun, 20 Sep 2020 09:14:04 +0200 Subject: [PATCH 07/18] prevent labels from overlapping --- .../api/BarChartAggregatorForIntervals.java | 25 ++++++++++++++++--- .../lucares/pdb/plot/api/BarChartHandler.java | 2 +- 2 files changed, 23 insertions(+), 4 deletions(-) diff --git a/pdb-plotting/src/main/java/org/lucares/pdb/plot/api/BarChartAggregatorForIntervals.java b/pdb-plotting/src/main/java/org/lucares/pdb/plot/api/BarChartAggregatorForIntervals.java index 2dba195..a444068 100644 --- a/pdb-plotting/src/main/java/org/lucares/pdb/plot/api/BarChartAggregatorForIntervals.java +++ b/pdb-plotting/src/main/java/org/lucares/pdb/plot/api/BarChartAggregatorForIntervals.java @@ -8,6 +8,7 @@ import java.util.UUID; import java.util.concurrent.atomic.AtomicLong; import org.lucares.recommind.logs.GnuplotAxis; +import org.lucares.recommind.logs.GnuplotSettings; public class BarChartAggregatorForIntervals implements CustomAggregator, IndexedAggregator, BarChart { @@ -24,8 +25,11 @@ public class BarChartAggregatorForIntervals implements CustomAggregator, Indexed private int count; - public BarChartAggregatorForIntervals(final Interval interval) { - this.interval = interval; + private final PlotSettings settings; + + public BarChartAggregatorForIntervals(final PlotSettings settings) { + this.settings = settings; + this.interval = settings.getInterval().get(); buckets = interval.getBuckets(); } @@ -72,20 +76,35 @@ public class BarChartAggregatorForIntervals implements CustomAggregator, Indexed final StringBuilder csv = new StringBuilder(); final boolean isMiddleSeries = getIndex() == numberOfDataSeries / 2; + int i = 0; int offset = 0; for (final String bucketId : bucketIds()) { final long count = buckets.get(bucketId).get(); csv.append(String.format(Locale.US, "%f", offset + getIndex() * SPACE_BETWEEN_BARS + 0.5)); csv.append(","); - csv.append(renderLabels && isMiddleSeries ? bucketId : ""); + csv.append(renderLabels && isMiddleSeries && showLabel(i, buckets.size()) ? bucketId : ""); csv.append(","); csv.append(count); csv.append("\n"); offset += numberOfDataSeries; + i++; } return csv.toString(); } + private boolean showLabel(final int index, final int numberOfBuckets) { + final int width = settings.getWidth(); + final int widthInPx = width - GnuplotSettings.GNUPLOT_LEFT_RIGHT_MARGIN; + + final long maxLabels = Math.max(1, widthInPx / (GnuplotSettings.TICKS_FONT_SIZE * 8)); + + if (maxLabels >= numberOfBuckets) { + return true; + } else { + return index % (int) Math.ceil(numberOfBuckets / maxLabels) == 0; + } + } + private SortedSet bucketIds() { return new TreeSet<>(buckets.keySet()); diff --git a/pdb-plotting/src/main/java/org/lucares/pdb/plot/api/BarChartHandler.java b/pdb-plotting/src/main/java/org/lucares/pdb/plot/api/BarChartHandler.java index 8779dad..8169917 100644 --- a/pdb-plotting/src/main/java/org/lucares/pdb/plot/api/BarChartHandler.java +++ b/pdb-plotting/src/main/java/org/lucares/pdb/plot/api/BarChartHandler.java @@ -82,7 +82,7 @@ public class BarChartHandler extends AggregateHandler { CustomAggregator createCustomAggregator(final Path tmpDir, final PlotSettings plotSettings, final long fromEpochMilli, final long toEpochMilli) { if (plotSettings.getInterval().isPresent()) { - return new BarChartAggregatorForIntervals(plotSettings.getInterval().get()); + return new BarChartAggregatorForIntervals(plotSettings); } else { return new BarChartAggregator(); } From 6bb6cdaea7c08c3a68926f0cdd561f0d6bc5c81b Mon Sep 17 00:00:00 2001 From: Andreas Huber Date: Sun, 20 Sep 2020 19:51:47 +0200 Subject: [PATCH 08/18] count disk reads --- .../lucares/pdb/diskstorage/DiskStorage.java | 3 +++ .../pdb/diskstorage/DiskStoreStats.java | 24 +++++++++++++++++++ .../pdb/datastore/internal/DataStore.java | 6 +++++ 3 files changed, 33 insertions(+) create mode 100644 block-storage/src/main/java/org/lucares/pdb/diskstorage/DiskStoreStats.java diff --git a/block-storage/src/main/java/org/lucares/pdb/diskstorage/DiskStorage.java b/block-storage/src/main/java/org/lucares/pdb/diskstorage/DiskStorage.java index e70d5a5..36436d5 100644 --- a/block-storage/src/main/java/org/lucares/pdb/diskstorage/DiskStorage.java +++ b/block-storage/src/main/java/org/lucares/pdb/diskstorage/DiskStorage.java @@ -53,6 +53,7 @@ public class DiskStorage implements AutoCloseable { try { LOGGER.trace("read block={} file={}", blockOffset, relativeDatabaseFileForLogging); + DiskStoreStats.incrementDiskRead(); final var byteBuffer = fileChannel.map(MapMode.READ_WRITE, blockOffset, blockSize); return new DiskBlock(blockOffset, byteBuffer); @@ -227,6 +228,7 @@ public class DiskStorage implements AutoCloseable { private FreeListNode readFreeListNode(final long freeListNodePosition) throws IOException { final var freeListNode = ByteBuffer.allocate(FREE_LIST_NODE_SIZE); + DiskStoreStats.incrementDiskRead(); fileChannel.read(freeListNode, freeListNodePosition); final long offset = freeListNodePosition; final long next = freeListNode.getLong(FREE_LIST_NEXT_POINTER); @@ -250,6 +252,7 @@ public class DiskStorage implements AutoCloseable { private long readFreeListRootNodePosition() throws IOException { final var freeListFirstBlock = ByteBuffer.allocate(8); + DiskStoreStats.incrementDiskRead(); fileChannel.read(freeListFirstBlock, FREE_LIST_ROOT_OFFSET); return freeListFirstBlock.getLong(0); } diff --git a/block-storage/src/main/java/org/lucares/pdb/diskstorage/DiskStoreStats.java b/block-storage/src/main/java/org/lucares/pdb/diskstorage/DiskStoreStats.java new file mode 100644 index 0000000..7de30d9 --- /dev/null +++ b/block-storage/src/main/java/org/lucares/pdb/diskstorage/DiskStoreStats.java @@ -0,0 +1,24 @@ +package org.lucares.pdb.diskstorage; + +import java.util.concurrent.atomic.AtomicLong; + +public class DiskStoreStats { + private static final AtomicLong diskRead = new AtomicLong(0); + + public static void incrementDiskRead() { + diskRead.incrementAndGet(); + } + + public static void resetDiskRead() { + diskRead.set(0); + } + + public static long getDiskRead() { + return diskRead.get(); + } + + public static long getAndResetDiskRead() { + + return diskRead.getAndSet(0); + } +} diff --git a/data-store/src/main/java/org/lucares/pdb/datastore/internal/DataStore.java b/data-store/src/main/java/org/lucares/pdb/datastore/internal/DataStore.java index a53019e..a908994 100644 --- a/data-store/src/main/java/org/lucares/pdb/datastore/internal/DataStore.java +++ b/data-store/src/main/java/org/lucares/pdb/datastore/internal/DataStore.java @@ -32,6 +32,7 @@ import org.lucares.pdb.datastore.lang.Expression; import org.lucares.pdb.datastore.lang.ExpressionToDocIdVisitor; import org.lucares.pdb.datastore.lang.NewProposerParser; import org.lucares.pdb.datastore.lang.QueryLanguageParser; +import org.lucares.pdb.diskstorage.DiskStoreStats; import org.lucares.pdb.map.PersistentMap; import org.lucares.utils.Preconditions; import org.lucares.utils.cache.HotEntryCache; @@ -235,11 +236,16 @@ public class DataStore implements AutoCloseable { public List search(final Query query) { try { + DiskStoreStats.resetDiskRead(); final List result = new ArrayList<>(); final PartitionLongList docIdsList = executeQuery(query); LOGGER.trace("query {} found {} docs", query, docIdsList.size()); + + DiskStoreStats.incrementDiskRead(); + LOGGER.info("Disk reads - search {}", DiskStoreStats.getAndResetDiskRead()); final List docs = mapDocIdsToDocs(docIdsList); + LOGGER.info("Disk reads - mappedToDocIds {}", DiskStoreStats.getAndResetDiskRead()); result.addAll(docs); return result; From f1980b196304a8cc308d9d6c5b036d53cafb234c Mon Sep 17 00:00:00 2001 From: Andreas Huber Date: Sun, 20 Sep 2020 19:52:08 +0200 Subject: [PATCH 09/18] log more details about search performance --- pdb-ui/src/main/resources/log4j2.xml | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/pdb-ui/src/main/resources/log4j2.xml b/pdb-ui/src/main/resources/log4j2.xml index 7fa98f9..637de31 100644 --- a/pdb-ui/src/main/resources/log4j2.xml +++ b/pdb-ui/src/main/resources/log4j2.xml @@ -44,9 +44,9 @@ + From 273c019df17f2d3f07e4453c59a4ac7ba0e1c9a8 Mon Sep 17 00:00:00 2001 From: Andreas Huber Date: Sun, 27 Sep 2020 07:53:52 +0200 Subject: [PATCH 10/18] remove unused class RuntimeExcecutionException --- .../utils/cache/RuntimeExcecutionException.java | 13 ------------- 1 file changed, 13 deletions(-) delete mode 100644 pdb-utils/src/main/java/org/lucares/utils/cache/RuntimeExcecutionException.java diff --git a/pdb-utils/src/main/java/org/lucares/utils/cache/RuntimeExcecutionException.java b/pdb-utils/src/main/java/org/lucares/utils/cache/RuntimeExcecutionException.java deleted file mode 100644 index c3088a0..0000000 --- a/pdb-utils/src/main/java/org/lucares/utils/cache/RuntimeExcecutionException.java +++ /dev/null @@ -1,13 +0,0 @@ -package org.lucares.utils.cache; - -import java.util.concurrent.ExecutionException; - -public class RuntimeExcecutionException extends RuntimeException { - - private static final long serialVersionUID = -3626851728980513527L; - - public RuntimeExcecutionException(final ExecutionException e) { - super(e); - } - -} From b8f77dc9a67c0b60574ba5b3d922cf21f7c2d787 Mon Sep 17 00:00:00 2001 From: Andreas Huber Date: Sun, 27 Sep 2020 08:21:24 +0200 Subject: [PATCH 11/18] replace custom timezones with UTC we are only using UTC --- .../lucares/utils/LongToDateBucketTest.java | 29 ++++--------------- 1 file changed, 5 insertions(+), 24 deletions(-) diff --git a/pdb-utils/src/test/java/org/lucares/utils/LongToDateBucketTest.java b/pdb-utils/src/test/java/org/lucares/utils/LongToDateBucketTest.java index 495c62a..314fd6d 100644 --- a/pdb-utils/src/test/java/org/lucares/utils/LongToDateBucketTest.java +++ b/pdb-utils/src/test/java/org/lucares/utils/LongToDateBucketTest.java @@ -54,30 +54,11 @@ public class LongToDateBucketTest { Assertions.assertEquals(expected, actual); } -// @Test -// public void testDateToDateIndexPrefix() { -// -// final long mid_201711 = OffsetDateTime.of(2017, 11, 23, 2, 2, 2, 0, ZoneOffset.UTC).toInstant().toEpochMilli(); -// final long mid_201712 = OffsetDateTime.of(2017, 12, 7, 1, 1, 1, 0, ZoneOffset.UTC).toInstant().toEpochMilli(); -// final long min_201801 = OffsetDateTime.of(2018, 1, 1, 0, 0, 0, 0, ZoneOffset.UTC).toInstant().toEpochMilli(); -// final long max_201801 = OffsetDateTime.of(2018, 1, 31, 23, 59, 59, 999_999_999, ZoneOffset.UTC).toInstant() -// .toEpochMilli(); -// final LongToDateBucket longToDateBucket = new LongToDateBucket("yyyyMM"); -// -// Assertions.assertEquals("201712", longToDateBucket.toDateIndexPrefix(mid_201712)); -// Assertions.assertEquals("201801", longToDateBucket.toDateIndexPrefix(min_201801)); -// Assertions.assertEquals("201801", longToDateBucket.toDateIndexPrefix(max_201801)); -// Assertions.assertEquals("201711", longToDateBucket.toDateIndexPrefix(mid_201711)); -// } - @Test public void testDateRanges() { - final OffsetDateTime mid_201712 = OffsetDateTime.of(2017, 12, 7, 1, 1, 1, 0, ZoneOffset.UTC) - .withOffsetSameInstant(ZoneOffset.ofHours(-2)); - final OffsetDateTime min_201801 = OffsetDateTime.of(2018, 1, 1, 0, 0, 0, 0, ZoneOffset.UTC) - .withOffsetSameInstant(ZoneOffset.ofHours(-8)); - final OffsetDateTime min_201802 = OffsetDateTime.of(2018, 2, 1, 0, 0, 0, 0, ZoneOffset.UTC) - .withOffsetSameInstant(ZoneOffset.ofHours(12)); + final OffsetDateTime mid_201712 = OffsetDateTime.of(2017, 12, 7, 1, 1, 1, 0, ZoneOffset.UTC); + final OffsetDateTime min_201801 = OffsetDateTime.of(2018, 1, 1, 0, 0, 0, 0, ZoneOffset.UTC); + final OffsetDateTime min_201802 = OffsetDateTime.of(2018, 2, 1, 0, 0, 0, 0, ZoneOffset.UTC); final LongToDateBucket longToDateBucket = new LongToDateBucket("yyyyMM", ChronoUnit.MONTHS); @@ -96,8 +77,8 @@ public class LongToDateBucketTest { @Test public void testDateRangeToEpochMilli() { - final OffsetDateTime mid_201712 = OffsetDateTime.of(2017, 12, 7, 1, 1, 1, 0, ZoneOffset.ofHours(3)); - final OffsetDateTime min_201802 = OffsetDateTime.of(2018, 2, 15, 0, 0, 0, 0, ZoneOffset.ofHours(7)); + final OffsetDateTime mid_201712 = OffsetDateTime.of(2017, 12, 7, 1, 1, 1, 0, ZoneOffset.UTC); + final OffsetDateTime min_201802 = OffsetDateTime.of(2018, 2, 15, 0, 0, 0, 0, ZoneOffset.UTC); final long exp_201712 = OffsetDateTime.of(2017, 12, 1, 0, 0, 0, 0, ZoneOffset.UTC).toInstant().toEpochMilli(); final long exp_201801 = OffsetDateTime.of(2018, 1, 1, 0, 0, 0, 0, ZoneOffset.UTC).toInstant().toEpochMilli(); From 439bf0b05b00bd208867278cf2d4023398289591 Mon Sep 17 00:00:00 2001 From: Andreas Huber Date: Sun, 27 Sep 2020 08:21:37 +0200 Subject: [PATCH 12/18] reduce log level --- .../java/org/lucares/recommind/logs/GnuplotFileGenerator.java | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/pdb-plotting/src/main/java/org/lucares/recommind/logs/GnuplotFileGenerator.java b/pdb-plotting/src/main/java/org/lucares/recommind/logs/GnuplotFileGenerator.java index 4067807..30f7d7c 100644 --- a/pdb-plotting/src/main/java/org/lucares/recommind/logs/GnuplotFileGenerator.java +++ b/pdb-plotting/src/main/java/org/lucares/recommind/logs/GnuplotFileGenerator.java @@ -73,7 +73,7 @@ public class GnuplotFileGenerator implements Appender { // render images when there are not data points on it. appendf(result, "-1 with lines notitle"); - LOGGER.info("{}", result); + LOGGER.debug("{}", result); return result.toString(); } From 550e4401e5d0667a2615093c5f52db0a6365de9e Mon Sep 17 00:00:00 2001 From: Andreas Huber Date: Sun, 27 Sep 2020 12:14:55 +0200 Subject: [PATCH 13/18] improve javadoc --- .../org/lucares/pdb/map/PersistentMapDiskNode.java | 12 ++++++------ 1 file changed, 6 insertions(+), 6 deletions(-) diff --git a/block-storage/src/main/java/org/lucares/pdb/map/PersistentMapDiskNode.java b/block-storage/src/main/java/org/lucares/pdb/map/PersistentMapDiskNode.java index 7693b55..133e37a 100644 --- a/block-storage/src/main/java/org/lucares/pdb/map/PersistentMapDiskNode.java +++ b/block-storage/src/main/java/org/lucares/pdb/map/PersistentMapDiskNode.java @@ -21,11 +21,11 @@ import org.lucares.utils.byteencoder.VariableByteEncoder; * 
  * Node layout:
  *
- *  ◀───────   Prefix ──────▶          ◀───────────────── Suffix ──────────────────▶
+ *  ────────   Prefix ──────▶          ◀───────────────── Suffix ───────────────────
  * ┏━━━┳━━━━━┳━━━━━┳━━━━━┳━━━┳╸╺╸╺╸╺╸╺┳━━━━━━━━━━━┳━━━━━━━━━━━━━━━┳━━━━━━━━━━━━━━━━━┓
  * ┃ 6 ┃ 5,6 ┃ 3,6 ┃ 3,2 ┃ ∅ ┃        ┃"ba"->"147"┃"foobar"->"467"┃"foobaz"->"value"┃
  * ┗━━━┻━━━━━┻━━━━━┻━━━━━┻━━━┻╸╺╸╺╸╺╸╺┻━━━━━━━━━━━┻━━━━━━━━━━━━━━━┻━━━━━━━━━━━━━━━━━┛
- *   │   │ │   │ │   │ │   └▶  null byte that serves as a separator for the prefix.
+ *   │   │ │   │ │   │ │   └▶  null byte that serves as a terminator for the prefix.
  *   │   │ │   │ │   │ └▶ size of the third last key ("ba" in this example)
  *   │   │ │   │ │   └▶ size of the third last value ("147" in this example)
  *   │   │ │   │ └▶ size of the second last key ("foobar" in this example)
@@ -202,13 +202,13 @@ public class PersistentMapDiskNode {
                 + String.join("\n", entries.values().stream().map(NodeEntry::toString).collect(Collectors.toList()));
     }
 
-    public  String toString(Function keyDecoder, Function valueDecoder) {
-        StringBuilder result = new StringBuilder();
+    public  String toString(final Function keyDecoder, final Function valueDecoder) {
+        final StringBuilder result = new StringBuilder();
         result.append("@");
         result.append(nodeOffset);
         result.append(": ");
-        for (NodeEntry e : entries.values()) {
-            String s = e.toString(keyDecoder, valueDecoder);
+        for (final NodeEntry e : entries.values()) {
+            final String s = e.toString(keyDecoder, valueDecoder);
             result.append("\n");
             result.append(s);
         }

From 78a0b7d70bb35a9c7fd05e9d433a72e368f73038 Mon Sep 17 00:00:00 2001
From: Andreas Huber 
Date: Sun, 27 Sep 2020 12:50:32 +0200
Subject: [PATCH 14/18] use a longer y-axis interval by default

this helps to not miss interesting events
---
 pdb-js/src/app/y-axis-definition/y-axis-definition.component.ts | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/pdb-js/src/app/y-axis-definition/y-axis-definition.component.ts b/pdb-js/src/app/y-axis-definition/y-axis-definition.component.ts
index 5307b05..d05fbf8 100644
--- a/pdb-js/src/app/y-axis-definition/y-axis-definition.component.ts
+++ b/pdb-js/src/app/y-axis-definition/y-axis-definition.component.ts
@@ -9,7 +9,7 @@ import { YAxisDefinition  } from '../plot.service';
 export class YAxisDefinitionComponent {
 
   yAxisScale: string = "LOG10";
-  yAxisUnit: string = "SECONDS";
+  yAxisUnit: string = "MINUTES";
   minYValue: number = 0;
   maxYValue: number = 300;
   

From 10155f9cdbc30dc7cdbfc60ffd5215bd9ac71a0b Mon Sep 17 00:00:00 2001
From: Andreas Huber 
Date: Sun, 27 Sep 2020 17:06:27 +0200
Subject: [PATCH 15/18] use special enum for DateBucket units

Preparation step for having custom intervals.
---
 .../internal/DateIndexExtension.java          |  6 +--
 .../org/lucares/pdb/plot/api/Interval.java    | 33 ------------
 .../pdb/plot/api/IntervalTimeUnit.java        | 35 +++++++++++++
 .../utils/BeginningOfNextInterval.java        | 16 +++---
 .../org/lucares/utils/DateBucketUnit.java     |  5 ++
 .../java/org/lucares/utils/EndOfInterval.java |  4 +-
 .../org/lucares/utils/LongToDateBucket.java   |  7 ++-
 .../org/lucares/utils/StartOfInterval.java    | 51 +++++++------------
 .../lucares/utils/LongToDateBucketTest.java   | 15 +++---
 9 files changed, 82 insertions(+), 90 deletions(-)
 create mode 100644 pdb-plotting/src/main/java/org/lucares/pdb/plot/api/IntervalTimeUnit.java
 create mode 100644 pdb-utils/src/main/java/org/lucares/utils/DateBucketUnit.java

diff --git a/data-store/src/main/java/org/lucares/pdb/datastore/internal/DateIndexExtension.java b/data-store/src/main/java/org/lucares/pdb/datastore/internal/DateIndexExtension.java
index 3d227b1..f305b05 100644
--- a/data-store/src/main/java/org/lucares/pdb/datastore/internal/DateIndexExtension.java
+++ b/data-store/src/main/java/org/lucares/pdb/datastore/internal/DateIndexExtension.java
@@ -1,6 +1,5 @@
 package org.lucares.pdb.datastore.internal;
 
-import java.time.temporal.ChronoUnit;
 import java.util.ArrayList;
 import java.util.Collection;
 import java.util.LinkedHashSet;
@@ -8,11 +7,12 @@ import java.util.List;
 import java.util.Set;
 
 import org.lucares.pdb.api.DateTimeRange;
+import org.lucares.utils.DateBucketUnit;
 import org.lucares.utils.LongToDateBucket;
 
 public class DateIndexExtension {
 
-    private static final LongToDateBucket longToDateBucket = new LongToDateBucket("yyyyMM", ChronoUnit.MONTHS);
+    private static final LongToDateBucket longToDateBucket = new LongToDateBucket("yyyyMM", DateBucketUnit.MONTH);
 
     static Set toDateIndexPrefix(final DateTimeRange dateRange) {
         return longToDateBucket.toDateIndexPrefix(dateRange.getStart(), dateRange.getEnd());
@@ -31,7 +31,7 @@ public class DateIndexExtension {
      */
     static List toPartitionIds(final DateTimeRange dateRange) {
         final List partitionIds = longToDateBucket.toPartitionIds(dateRange.getStart(), dateRange.getEnd(),
-                ChronoUnit.MONTHS);
+                DateBucketUnit.MONTH);
 
         final List result = new ArrayList<>();
         for (final String partitionId : partitionIds) {
diff --git a/pdb-plotting/src/main/java/org/lucares/pdb/plot/api/Interval.java b/pdb-plotting/src/main/java/org/lucares/pdb/plot/api/Interval.java
index f4dffa9..2059c22 100644
--- a/pdb-plotting/src/main/java/org/lucares/pdb/plot/api/Interval.java
+++ b/pdb-plotting/src/main/java/org/lucares/pdb/plot/api/Interval.java
@@ -1,6 +1,5 @@
 package org.lucares.pdb.plot.api;
 
-import java.time.temporal.ChronoUnit;
 import java.util.HashMap;
 import java.util.List;
 import java.util.Map;
@@ -10,38 +9,6 @@ import org.lucares.pdb.api.DateTimeRange;
 import org.lucares.utils.LongToDateBucket;
 
 public class Interval {
-    public enum IntervalTimeUnit {
-        MINUTE, HOUR, DAY, WEEK, MONTH, YEAR;
-
-        public static boolean isValid(final String value) {
-            for (final IntervalTimeUnit e : values()) {
-                if (e.name().equals(value)) {
-                    return true;
-                }
-            }
-            return false;
-        }
-
-        public ChronoUnit toChronoUnit() {
-            switch (this) {
-            case MINUTE:
-                return ChronoUnit.MINUTES;
-            case HOUR:
-                return ChronoUnit.HOURS;
-            case DAY:
-                return ChronoUnit.DAYS;
-            case WEEK:
-                return ChronoUnit.WEEKS;
-            case MONTH:
-                return ChronoUnit.MONTHS;
-            case YEAR:
-                return ChronoUnit.YEARS;
-            default:
-                throw new IllegalArgumentException("Unexpected value: " + this);
-            }
-        }
-    }
-
     private final IntervalTimeUnit intervalTimeUnit;
 
     private final int value;
diff --git a/pdb-plotting/src/main/java/org/lucares/pdb/plot/api/IntervalTimeUnit.java b/pdb-plotting/src/main/java/org/lucares/pdb/plot/api/IntervalTimeUnit.java
new file mode 100644
index 0000000..a30af50
--- /dev/null
+++ b/pdb-plotting/src/main/java/org/lucares/pdb/plot/api/IntervalTimeUnit.java
@@ -0,0 +1,35 @@
+package org.lucares.pdb.plot.api;
+
+import org.lucares.utils.DateBucketUnit;
+
+public enum IntervalTimeUnit {
+    MINUTE, HOUR, DAY, WEEK, MONTH, YEAR;
+
+    public static boolean isValid(final String value) {
+        for (final IntervalTimeUnit e : values()) {
+            if (e.name().equals(value)) {
+                return true;
+            }
+        }
+        return false;
+    }
+
+    public DateBucketUnit toChronoUnit() {
+        switch (this) {
+        case MINUTE:
+            return DateBucketUnit.MINUTE;
+        case HOUR:
+            return DateBucketUnit.HOUR;
+        case DAY:
+            return DateBucketUnit.DAY;
+        case WEEK:
+            return DateBucketUnit.WEEK;
+        case MONTH:
+            return DateBucketUnit.MONTH;
+        case YEAR:
+            return DateBucketUnit.YEAR;
+        default:
+            throw new IllegalArgumentException("Unexpected value: " + this);
+        }
+    }
+}
\ No newline at end of file
diff --git a/pdb-utils/src/main/java/org/lucares/utils/BeginningOfNextInterval.java b/pdb-utils/src/main/java/org/lucares/utils/BeginningOfNextInterval.java
index 7029975..f7f7ffb 100644
--- a/pdb-utils/src/main/java/org/lucares/utils/BeginningOfNextInterval.java
+++ b/pdb-utils/src/main/java/org/lucares/utils/BeginningOfNextInterval.java
@@ -6,9 +6,9 @@ import java.time.temporal.TemporalAdjuster;
 
 public class BeginningOfNextInterval implements TemporalAdjuster {
 
-    private final ChronoUnit unit;
+    private final DateBucketUnit unit;
 
-    public BeginningOfNextInterval(final ChronoUnit unit) {
+    public BeginningOfNextInterval(final DateBucketUnit unit) {
         this.unit = unit;
     }
 
@@ -19,27 +19,27 @@ public class BeginningOfNextInterval implements TemporalAdjuster {
         result = result.with(startOfInterval);
 
         switch (unit) {
-        case MINUTES: {
+        case MINUTE: {
             result = result.plus(1, ChronoUnit.MINUTES);
             break;
         }
-        case HOURS: {
+        case HOUR: {
             result = result.plus(1, ChronoUnit.HOURS);
             break;
         }
-        case DAYS: {
+        case DAY: {
             result = result.plus(1, ChronoUnit.DAYS);
             break;
         }
-        case WEEKS: {
+        case WEEK: {
             result = result.plus(1, ChronoUnit.WEEKS);
             break;
         }
-        case MONTHS: {
+        case MONTH: {
             result = result.plus(1, ChronoUnit.MONTHS);
             break;
         }
-        case YEARS: {
+        case YEAR: {
             result = result.plus(1, ChronoUnit.YEARS);
             break;
         }
diff --git a/pdb-utils/src/main/java/org/lucares/utils/DateBucketUnit.java b/pdb-utils/src/main/java/org/lucares/utils/DateBucketUnit.java
new file mode 100644
index 0000000..d5017b3
--- /dev/null
+++ b/pdb-utils/src/main/java/org/lucares/utils/DateBucketUnit.java
@@ -0,0 +1,5 @@
+package org.lucares.utils;
+
+public enum DateBucketUnit {
+    MINUTE, HOUR, DAY, WEEK, MONTH, YEAR;
+}
diff --git a/pdb-utils/src/main/java/org/lucares/utils/EndOfInterval.java b/pdb-utils/src/main/java/org/lucares/utils/EndOfInterval.java
index 14f7147..c610b92 100644
--- a/pdb-utils/src/main/java/org/lucares/utils/EndOfInterval.java
+++ b/pdb-utils/src/main/java/org/lucares/utils/EndOfInterval.java
@@ -6,9 +6,9 @@ import java.time.temporal.TemporalAdjuster;
 
 public class EndOfInterval implements TemporalAdjuster {
 
-    private final ChronoUnit unit;
+    private final DateBucketUnit unit;
 
-    public EndOfInterval(final ChronoUnit unit) {
+    public EndOfInterval(final DateBucketUnit unit) {
         this.unit = unit;
     }
 
diff --git a/pdb-utils/src/main/java/org/lucares/utils/LongToDateBucket.java b/pdb-utils/src/main/java/org/lucares/utils/LongToDateBucket.java
index f350ea1..2ef0778 100644
--- a/pdb-utils/src/main/java/org/lucares/utils/LongToDateBucket.java
+++ b/pdb-utils/src/main/java/org/lucares/utils/LongToDateBucket.java
@@ -4,7 +4,6 @@ import java.time.Instant;
 import java.time.OffsetDateTime;
 import java.time.ZoneOffset;
 import java.time.format.DateTimeFormatter;
-import java.time.temporal.ChronoUnit;
 import java.util.ArrayList;
 import java.util.List;
 import java.util.Map.Entry;
@@ -55,14 +54,14 @@ public class LongToDateBucket {
      */
     private final DateTimeFormatter datePattern;
 
-    ChronoUnit chronoUnit;
+    DateBucketUnit chronoUnit;
 
     // visible for test
     final ConcurrentNavigableMap datePrefixCache = new ConcurrentSkipListMap<>();
 
     private final AtomicReference lastAccessed = new AtomicReference<>(null);
 
-    public LongToDateBucket(final String dateFormatPattern, final ChronoUnit chronoUnit) {
+    public LongToDateBucket(final String dateFormatPattern, final DateBucketUnit chronoUnit) {
         this.chronoUnit = chronoUnit;
         this.datePattern = DateTimeFormatter.ofPattern(dateFormatPattern);
     }
@@ -118,7 +117,7 @@ public class LongToDateBucket {
      * @return
      */
     public List toPartitionIds(final OffsetDateTime start, final OffsetDateTime end,
-            final ChronoUnit chronoUnit) {
+            final DateBucketUnit chronoUnit) {
         final List result = new ArrayList<>();
 
         OffsetDateTime current = start;
diff --git a/pdb-utils/src/main/java/org/lucares/utils/StartOfInterval.java b/pdb-utils/src/main/java/org/lucares/utils/StartOfInterval.java
index f88f033..9fed363 100644
--- a/pdb-utils/src/main/java/org/lucares/utils/StartOfInterval.java
+++ b/pdb-utils/src/main/java/org/lucares/utils/StartOfInterval.java
@@ -1,62 +1,50 @@
 package org.lucares.utils;
 
 import java.time.temporal.ChronoField;
-import java.time.temporal.ChronoUnit;
 import java.time.temporal.Temporal;
 import java.time.temporal.TemporalAdjuster;
 
 public class StartOfInterval implements TemporalAdjuster {
 
-    private final ChronoUnit unit;
+    private final DateBucketUnit unit;
 
-    public StartOfInterval(final ChronoUnit unit) {
+    public StartOfInterval(final DateBucketUnit unit) {
         this.unit = unit;
     }
 
     @Override
     public Temporal adjustInto(final Temporal temporal) {
         Temporal result = temporal;
-        for (final ChronoUnit chronoUnit : ChronoUnit.values()) {
-            if (chronoUnit.compareTo(unit) >= 0) {
+        result = result.with(ChronoField.NANO_OF_SECOND, 0);
+        result = result.with(ChronoField.MICRO_OF_SECOND, 0);
+        result = result.with(ChronoField.MILLI_OF_SECOND, 0);
+        result = result.with(ChronoField.SECOND_OF_MINUTE, 0);
+
+        for (final DateBucketUnit dateBucketUnit : DateBucketUnit.values()) {
+            if (dateBucketUnit.compareTo(unit) >= 0) {
                 break;
             }
 
-            switch (chronoUnit) {
-            case NANOS: {
-                result = result.with(ChronoField.NANO_OF_SECOND, 0);
-                break;
-            }
-            case MICROS: {
-                result = result.with(ChronoField.MICRO_OF_SECOND, 0);
-                break;
-            }
-            case MILLIS: {
-                result = result.with(ChronoField.MILLI_OF_SECOND, 0);
-                break;
-            }
-            case SECONDS: {
-                result = result.with(ChronoField.SECOND_OF_MINUTE, 0);
-                break;
-            }
-            case MINUTES: {
+            switch (dateBucketUnit) {
+            case MINUTE: {
                 result = result.with(ChronoField.MINUTE_OF_HOUR, 0);
                 break;
             }
-            case HOURS: {
+            case HOUR: {
                 result = result.with(ChronoField.HOUR_OF_DAY, 0);
                 break;
             }
-            case DAYS: {
+            case DAY: {
                 switch (unit) {
-                case WEEKS: {
+                case WEEK: {
                     result = result.with(ChronoField.DAY_OF_WEEK, 1);
                     break;
                 }
-                case MONTHS: {
+                case MONTH: {
                     result = result.with(ChronoField.DAY_OF_MONTH, 1);
                     break;
                 }
-                case YEARS: {
+                case YEAR: {
                     result = result.with(ChronoField.MONTH_OF_YEAR, 1);
                     break;
                 }
@@ -65,15 +53,14 @@ public class StartOfInterval implements TemporalAdjuster {
                 }
                 break;
             }
-            case MONTHS: {
+            case MONTH: {
                 result = result.with(ChronoField.MONTH_OF_YEAR, 1);
                 break;
             }
-            case HALF_DAYS:
-            case WEEKS:
+            case WEEK:
                 break;
             default:
-                throw new IllegalArgumentException("Unexpected value: " + chronoUnit);
+                throw new IllegalArgumentException("Unexpected value: " + dateBucketUnit);
             }
         }
 
diff --git a/pdb-utils/src/test/java/org/lucares/utils/LongToDateBucketTest.java b/pdb-utils/src/test/java/org/lucares/utils/LongToDateBucketTest.java
index 314fd6d..a3172d3 100644
--- a/pdb-utils/src/test/java/org/lucares/utils/LongToDateBucketTest.java
+++ b/pdb-utils/src/test/java/org/lucares/utils/LongToDateBucketTest.java
@@ -2,7 +2,6 @@ package org.lucares.utils;
 
 import java.time.OffsetDateTime;
 import java.time.ZoneOffset;
-import java.time.temporal.ChronoUnit;
 import java.util.ArrayList;
 import java.util.Arrays;
 import java.util.DoubleSummaryStatistics;
@@ -49,7 +48,7 @@ public class LongToDateBucketTest {
     @MethodSource("provider")
     public void test(final OffsetDateTime start, final OffsetDateTime end, final Set expected) {
 
-        final Set actual = new LongToDateBucket("yyyyMM", ChronoUnit.MONTHS).toDateIndexPrefix(start, end);
+        final Set actual = new LongToDateBucket("yyyyMM", DateBucketUnit.MONTH).toDateIndexPrefix(start, end);
 
         Assertions.assertEquals(expected, actual);
     }
@@ -60,18 +59,18 @@ public class LongToDateBucketTest {
         final OffsetDateTime min_201801 = OffsetDateTime.of(2018, 1, 1, 0, 0, 0, 0, ZoneOffset.UTC);
         final OffsetDateTime min_201802 = OffsetDateTime.of(2018, 2, 1, 0, 0, 0, 0, ZoneOffset.UTC);
 
-        final LongToDateBucket longToDateBucket = new LongToDateBucket("yyyyMM", ChronoUnit.MONTHS);
+        final LongToDateBucket longToDateBucket = new LongToDateBucket("yyyyMM", DateBucketUnit.MONTH);
 
         final List dateIndexPrefixesWithEmptyCache = longToDateBucket.toPartitionIds(mid_201712, min_201802,
-                ChronoUnit.MONTHS);
+                DateBucketUnit.MONTH);
         Assertions.assertEquals(Arrays.asList("201712", "201801", "201802"), dateIndexPrefixesWithEmptyCache);
 
         final List dateIndexPrefixesWithFilledCache = longToDateBucket.toPartitionIds(mid_201712, min_201801,
-                ChronoUnit.MONTHS);
+                DateBucketUnit.MONTH);
         Assertions.assertEquals(Arrays.asList("201712", "201801"), dateIndexPrefixesWithFilledCache);
 
         final List dateIndexPrefixesOneMonth = longToDateBucket.toPartitionIds(mid_201712, mid_201712,
-                ChronoUnit.MONTHS);
+                DateBucketUnit.MONTH);
         Assertions.assertEquals(Arrays.asList("201712"), dateIndexPrefixesOneMonth);
     }
 
@@ -84,7 +83,7 @@ public class LongToDateBucketTest {
         final long exp_201801 = OffsetDateTime.of(2018, 1, 1, 0, 0, 0, 0, ZoneOffset.UTC).toInstant().toEpochMilli();
         final long exp_201802 = OffsetDateTime.of(2018, 2, 1, 0, 0, 0, 0, ZoneOffset.UTC).toInstant().toEpochMilli();
 
-        final LongToDateBucket longToDateBucket = new LongToDateBucket("yyyyMM", ChronoUnit.MONTHS);
+        final LongToDateBucket longToDateBucket = new LongToDateBucket("yyyyMM", DateBucketUnit.MONTH);
 
         final List dateIndexEpochMillis = longToDateBucket.toDateIndexEpochMillis(mid_201712, min_201802);
         Assertions.assertEquals(Arrays.asList(exp_201712, exp_201801, exp_201802), dateIndexEpochMillis);
@@ -102,7 +101,7 @@ public class LongToDateBucketTest {
         final int warmup = 20 * factor;
         final int rounds = warmup + 20;
 
-        final LongToDateBucket longToDateBucket = new LongToDateBucket("yyyyMM", ChronoUnit.MONTHS);
+        final LongToDateBucket longToDateBucket = new LongToDateBucket("yyyyMM", DateBucketUnit.MONTH);
 
         // fill the cache
         for (long i = min; i < max; i += 3600 * 24 * 28) {

From 2f4d1f701b8f6ca81a4c73c697056cc29a69043c Mon Sep 17 00:00:00 2001
From: Andreas Huber 
Date: Sun, 27 Sep 2020 17:15:02 +0200
Subject: [PATCH 16/18] add interval for seconds for bar charts

---
 .../app/visualization-page/visualization-page.component.html | 1 +
 .../src/main/java/org/lucares/pdb/plot/api/Interval.java     | 2 ++
 .../main/java/org/lucares/pdb/plot/api/IntervalTimeUnit.java | 4 +++-
 .../main/java/org/lucares/utils/BeginningOfNextInterval.java | 4 ++++
 .../src/main/java/org/lucares/utils/DateBucketUnit.java      | 2 +-
 .../src/main/java/org/lucares/utils/StartOfInterval.java     | 5 ++++-
 6 files changed, 15 insertions(+), 3 deletions(-)

diff --git a/pdb-js/src/app/visualization-page/visualization-page.component.html b/pdb-js/src/app/visualization-page/visualization-page.component.html
index 5aaad68..193daeb 100644
--- a/pdb-js/src/app/visualization-page/visualization-page.component.html
+++ b/pdb-js/src/app/visualization-page/visualization-page.component.html
@@ -36,6 +36,7 @@
         Intervals (only bar chart):
         
           -
+          second
           minute
           hour
           day
diff --git a/pdb-plotting/src/main/java/org/lucares/pdb/plot/api/Interval.java b/pdb-plotting/src/main/java/org/lucares/pdb/plot/api/Interval.java
index 2059c22..1e45139 100644
--- a/pdb-plotting/src/main/java/org/lucares/pdb/plot/api/Interval.java
+++ b/pdb-plotting/src/main/java/org/lucares/pdb/plot/api/Interval.java
@@ -28,6 +28,8 @@ public class Interval {
 
     private String toDateFormatForBucketer(final IntervalTimeUnit intervalTimeUnit) {
         switch (intervalTimeUnit) {
+        case SECOND:
+            return "yyyy-MM-dd'\\n'HH:mm:ss";
         case MINUTE:
             return "yyyy-MM-dd'\\n'HH:mm";
         case HOUR:
diff --git a/pdb-plotting/src/main/java/org/lucares/pdb/plot/api/IntervalTimeUnit.java b/pdb-plotting/src/main/java/org/lucares/pdb/plot/api/IntervalTimeUnit.java
index a30af50..d8cd732 100644
--- a/pdb-plotting/src/main/java/org/lucares/pdb/plot/api/IntervalTimeUnit.java
+++ b/pdb-plotting/src/main/java/org/lucares/pdb/plot/api/IntervalTimeUnit.java
@@ -3,7 +3,7 @@ package org.lucares.pdb.plot.api;
 import org.lucares.utils.DateBucketUnit;
 
 public enum IntervalTimeUnit {
-    MINUTE, HOUR, DAY, WEEK, MONTH, YEAR;
+    SECOND, MINUTE, HOUR, DAY, WEEK, MONTH, YEAR;
 
     public static boolean isValid(final String value) {
         for (final IntervalTimeUnit e : values()) {
@@ -16,6 +16,8 @@ public enum IntervalTimeUnit {
 
     public DateBucketUnit toChronoUnit() {
         switch (this) {
+        case SECOND:
+            return DateBucketUnit.SECOND;
         case MINUTE:
             return DateBucketUnit.MINUTE;
         case HOUR:
diff --git a/pdb-utils/src/main/java/org/lucares/utils/BeginningOfNextInterval.java b/pdb-utils/src/main/java/org/lucares/utils/BeginningOfNextInterval.java
index f7f7ffb..d039c2e 100644
--- a/pdb-utils/src/main/java/org/lucares/utils/BeginningOfNextInterval.java
+++ b/pdb-utils/src/main/java/org/lucares/utils/BeginningOfNextInterval.java
@@ -19,6 +19,10 @@ public class BeginningOfNextInterval implements TemporalAdjuster {
         result = result.with(startOfInterval);
 
         switch (unit) {
+        case SECOND: {
+            result = result.plus(1, ChronoUnit.SECONDS);
+            break;
+        }
         case MINUTE: {
             result = result.plus(1, ChronoUnit.MINUTES);
             break;
diff --git a/pdb-utils/src/main/java/org/lucares/utils/DateBucketUnit.java b/pdb-utils/src/main/java/org/lucares/utils/DateBucketUnit.java
index d5017b3..a9ce487 100644
--- a/pdb-utils/src/main/java/org/lucares/utils/DateBucketUnit.java
+++ b/pdb-utils/src/main/java/org/lucares/utils/DateBucketUnit.java
@@ -1,5 +1,5 @@
 package org.lucares.utils;
 
 public enum DateBucketUnit {
-    MINUTE, HOUR, DAY, WEEK, MONTH, YEAR;
+    SECOND, MINUTE, HOUR, DAY, WEEK, MONTH, YEAR;
 }
diff --git a/pdb-utils/src/main/java/org/lucares/utils/StartOfInterval.java b/pdb-utils/src/main/java/org/lucares/utils/StartOfInterval.java
index 9fed363..dfca56b 100644
--- a/pdb-utils/src/main/java/org/lucares/utils/StartOfInterval.java
+++ b/pdb-utils/src/main/java/org/lucares/utils/StartOfInterval.java
@@ -18,7 +18,6 @@ public class StartOfInterval implements TemporalAdjuster {
         result = result.with(ChronoField.NANO_OF_SECOND, 0);
         result = result.with(ChronoField.MICRO_OF_SECOND, 0);
         result = result.with(ChronoField.MILLI_OF_SECOND, 0);
-        result = result.with(ChronoField.SECOND_OF_MINUTE, 0);
 
         for (final DateBucketUnit dateBucketUnit : DateBucketUnit.values()) {
             if (dateBucketUnit.compareTo(unit) >= 0) {
@@ -26,6 +25,10 @@ public class StartOfInterval implements TemporalAdjuster {
             }
 
             switch (dateBucketUnit) {
+            case SECOND: {
+                result = result.with(ChronoField.SECOND_OF_MINUTE, 0);
+                break;
+            }
             case MINUTE: {
                 result = result.with(ChronoField.MINUTE_OF_HOUR, 0);
                 break;

From e71ab0744057d0ca38808af0f3bc4e5c8c5eab86 Mon Sep 17 00:00:00 2001
From: Andreas Huber 
Date: Sun, 27 Sep 2020 20:02:56 +0200
Subject: [PATCH 17/18] fix labels overlapping in bar chart x-axis

---
 .../lucares/pdb/plot/api/BarChartAggregatorForIntervals.java    | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/pdb-plotting/src/main/java/org/lucares/pdb/plot/api/BarChartAggregatorForIntervals.java b/pdb-plotting/src/main/java/org/lucares/pdb/plot/api/BarChartAggregatorForIntervals.java
index a444068..e3cd661 100644
--- a/pdb-plotting/src/main/java/org/lucares/pdb/plot/api/BarChartAggregatorForIntervals.java
+++ b/pdb-plotting/src/main/java/org/lucares/pdb/plot/api/BarChartAggregatorForIntervals.java
@@ -101,7 +101,7 @@ public class BarChartAggregatorForIntervals implements CustomAggregator, Indexed
         if (maxLabels >= numberOfBuckets) {
             return true;
         } else {
-            return index % (int) Math.ceil(numberOfBuckets / maxLabels) == 0;
+            return index % (int) Math.ceil(numberOfBuckets / (double) maxLabels) == 0;
         }
     }
 

From d21ef485593cdb5f325605ca1fa69f2c8bc6fb5e Mon Sep 17 00:00:00 2001
From: Andreas Huber 
Date: Sun, 27 Sep 2020 20:07:26 +0200
Subject: [PATCH 18/18] make tic labels optional for bar charts

---
 pdb-js/src/app/plot.service.ts                         |  1 +
 .../visualization-page.component.html                  |  3 +++
 .../visualization-page/visualization-page.component.ts |  2 ++
 .../java/org/lucares/pdb/plot/api/BarChartHandler.java |  2 +-
 .../java/org/lucares/pdb/plot/api/PlotSettings.java    | 10 ++++++++++
 .../org/lucares/recommind/logs/GnuplotSettings.java    |  9 +++++++++
 .../main/java/org/lucares/recommind/logs/Plotter.java  |  1 +
 .../org/lucares/pdbui/PlotSettingsTransformer.java     |  1 +
 .../java/org/lucares/pdbui/domain/PlotRequest.java     | 10 ++++++++++
 9 files changed, 38 insertions(+), 1 deletion(-)

diff --git a/pdb-js/src/app/plot.service.ts b/pdb-js/src/app/plot.service.ts
index 9f93370..a11ea16 100644
--- a/pdb-js/src/app/plot.service.ts
+++ b/pdb-js/src/app/plot.service.ts
@@ -202,6 +202,7 @@ export class PlotRequest {
   generateThumbnail : boolean;
   intervalUnit: string;
   intervalValue: number;
+  renderBarChartTickLabels: boolean = false;
   
   copy(): PlotRequest {
     return JSON.parse(JSON.stringify(this));
diff --git a/pdb-js/src/app/visualization-page/visualization-page.component.html b/pdb-js/src/app/visualization-page/visualization-page.component.html
index 193daeb..cd209a7 100644
--- a/pdb-js/src/app/visualization-page/visualization-page.component.html
+++ b/pdb-js/src/app/visualization-page/visualization-page.component.html
@@ -46,6 +46,9 @@
         
       
       
+      

+        Show Tic Labels (bar chart)
+      

      
      
      
diff --git a/pdb-js/src/app/visualization-page/visualization-page.component.ts b/pdb-js/src/app/visualization-page/visualization-page.component.ts
index 75eefdc..13fc208 100644
--- a/pdb-js/src/app/visualization-page/visualization-page.component.ts
+++ b/pdb-js/src/app/visualization-page/visualization-page.component.ts
@@ -53,6 +53,7 @@ export class VisualizationPageComponent implements OnInit {
   
   intervalUnit = 'NO_INTERVAL';
   intervalValue = 1;
+  renderBarChartTickLabels = false;
 
   constructor(private plotService: PlotService, private snackBar: MatSnackBar) {
   }
@@ -172,6 +173,7 @@ export class VisualizationPageComponent implements OnInit {
     request.generateThumbnail = this.enableGallery;
     request.intervalUnit = this.intervalUnit;
     request.intervalValue = this.intervalValue;
+    request.renderBarChartTickLabels = this.renderBarChartTickLabels;
     return request;
   }
   
diff --git a/pdb-plotting/src/main/java/org/lucares/pdb/plot/api/BarChartHandler.java b/pdb-plotting/src/main/java/org/lucares/pdb/plot/api/BarChartHandler.java
index 8169917..dd25e02 100644
--- a/pdb-plotting/src/main/java/org/lucares/pdb/plot/api/BarChartHandler.java
+++ b/pdb-plotting/src/main/java/org/lucares/pdb/plot/api/BarChartHandler.java
@@ -56,7 +56,7 @@ public class BarChartHandler extends AggregateHandler {
         appendln(result, barAggregator.asCsv(settings.isRenderLabels()));
         appendln(result, "EOD");
 
-        if (settings.isRenderLabels()) {
+        if (settings.isRenderLabels() && settings.isRenderBarChartTickLabels()) {
             appendfln(result, barAggregator.renderLabels(getxAxis()));
         }
 
diff --git a/pdb-plotting/src/main/java/org/lucares/pdb/plot/api/PlotSettings.java b/pdb-plotting/src/main/java/org/lucares/pdb/plot/api/PlotSettings.java
index 4b1552f..e0e22ce 100644
--- a/pdb-plotting/src/main/java/org/lucares/pdb/plot/api/PlotSettings.java
+++ b/pdb-plotting/src/main/java/org/lucares/pdb/plot/api/PlotSettings.java
@@ -45,6 +45,8 @@ public class PlotSettings {
 
     private Interval interval;
 
+    private boolean renderBarChartTickLabels;
+
     public String getQuery() {
         return query;
     }
@@ -197,4 +199,12 @@ public class PlotSettings {
         this.interval = interval;
     }
 
+    public boolean isRenderBarChartTickLabels() {
+        return renderBarChartTickLabels;
+    }
+
+    public void setRenderBarChartTickLabels(final boolean renderBarChartTickLabels) {
+        this.renderBarChartTickLabels = renderBarChartTickLabels;
+    }
+
 }
diff --git a/pdb-plotting/src/main/java/org/lucares/recommind/logs/GnuplotSettings.java b/pdb-plotting/src/main/java/org/lucares/recommind/logs/GnuplotSettings.java
index 6a53893..d12e35f 100644
--- a/pdb-plotting/src/main/java/org/lucares/recommind/logs/GnuplotSettings.java
+++ b/pdb-plotting/src/main/java/org/lucares/recommind/logs/GnuplotSettings.java
@@ -35,6 +35,7 @@ public class GnuplotSettings {
     private AxisSettings xAxisSettings = new AxisSettings();
     private boolean renderLabels = true;
     private DateTimeRange dateTimeRange;
+    private boolean renderBarChartTickLabels;
 
     public GnuplotSettings(final Path output) {
         this.output = output;
@@ -151,6 +152,14 @@ public class GnuplotSettings {
         }
     }
 
+    public boolean isRenderBarChartTickLabels() {
+        return renderBarChartTickLabels;
+    }
+
+    public void setRenderBarChartTickLabels(final boolean renderBarChartTickLabels) {
+        this.renderBarChartTickLabels = renderBarChartTickLabels;
+    }
+
     // plot 'sample.txt' using 1:2 title 'Bytes' with linespoints 2
 
 }
diff --git a/pdb-plotting/src/main/java/org/lucares/recommind/logs/Plotter.java b/pdb-plotting/src/main/java/org/lucares/recommind/logs/Plotter.java
index a6cec0f..1c62c63 100644
--- a/pdb-plotting/src/main/java/org/lucares/recommind/logs/Plotter.java
+++ b/pdb-plotting/src/main/java/org/lucares/recommind/logs/Plotter.java
@@ -113,6 +113,7 @@ public class Plotter {
 
                 gnuplotSettings.setAggregates(plotSettings.getAggregates());
                 gnuplotSettings.setKeyOutside(plotSettings.isKeyOutside());
+                gnuplotSettings.setRenderBarChartTickLabels(plotSettings.isRenderBarChartTickLabels());
                 gnuplot.plot(gnuplotSettings, dataSeries);
             }
 
diff --git a/pdb-ui/src/main/java/org/lucares/pdbui/PlotSettingsTransformer.java b/pdb-ui/src/main/java/org/lucares/pdbui/PlotSettingsTransformer.java
index 8f3bf08..da47781 100644
--- a/pdb-ui/src/main/java/org/lucares/pdbui/PlotSettingsTransformer.java
+++ b/pdb-ui/src/main/java/org/lucares/pdbui/PlotSettingsTransformer.java
@@ -35,6 +35,7 @@ class PlotSettingsTransformer {
         result.setY2(request.getY2());
         result.setAggregates(toAggregateInternal(request.getY1(), request.getY2(), request.getAggregates()));
         result.setInterval(Interval.create(request.getIntervalUnit(), request.getIntervalValue(), result.dateRange()));
+        result.setRenderBarChartTickLabels(request.isRenderBarChartTickLabels());
 
         return result;
     }
diff --git a/pdb-ui/src/main/java/org/lucares/pdbui/domain/PlotRequest.java b/pdb-ui/src/main/java/org/lucares/pdbui/domain/PlotRequest.java
index d4d8a8c..aa55c8c 100644
--- a/pdb-ui/src/main/java/org/lucares/pdbui/domain/PlotRequest.java
+++ b/pdb-ui/src/main/java/org/lucares/pdbui/domain/PlotRequest.java
@@ -37,6 +37,8 @@ public class PlotRequest {
     private String intervalUnit;
     private int intervalValue;
 
+    private boolean renderBarChartTickLabels;
+
     public String getQuery() {
         return query;
     }
@@ -169,4 +171,12 @@ public class PlotRequest {
     public void setIntervalValue(final int intervalValue) {
         this.intervalValue = intervalValue;
     }
+
+    public boolean isRenderBarChartTickLabels() {
+        return renderBarChartTickLabels;
+    }
+
+    public void setRenderBarChartTickLabels(final boolean renderBarChartTickLabels) {
+        this.renderBarChartTickLabels = renderBarChartTickLabels;
+    }
 }