add markdown support for text widgets

block-storage/src/main/java/org/lucares/pdb/map/PersistentMapStats.java

@@ -1,6 +1,6 @@
 package org.lucares.pdb.map;
 
-import java.util.List;
+import org.lucares.utils.HumanBytes;
 
 public class PersistentMapStats {
     private long values = 0;
@@ -87,7 +87,7 @@ public class PersistentMapStats {
         builder.append(String.format("\navg. depth= %.2f", averageDepth));
         builder.append(String.format("\navg. fill=  %.2f", averageFill));
         builder.append(String.format("\nvalues/node=%.2f", averageValuesInNode));
-        builder.append(String.format("\nfile size=  %s\n", toHumanBytes(fileSize)));
+        builder.append(String.format("\nfile size=  %s\n", HumanBytes.toHumanBytes(fileSize)));
         return builder.toString();
     }
 
@@ -100,21 +100,9 @@ public class PersistentMapStats {
         builder.append(String.format("\navg. depth= %.2f -> %.2f", old.averageDepth, averageDepth));
         builder.append(String.format("\navg. fill=  %.2f -> %.2f", old.averageFill, averageFill));
         builder.append(String.format("\nvalues/node=%.2f -> %.2f", old.averageValuesInNode, averageValuesInNode));
-        builder.append(String.format("\nfile size=  %s -> %s\n", toHumanBytes(old.fileSize), toHumanBytes(fileSize)));
+        builder.append(String.format("\nfile size=  %s -> %s\n", HumanBytes.toHumanBytes(old.fileSize),
+                HumanBytes.toHumanBytes(fileSize)));
         return builder.toString();
     }
 
-    private static String toHumanBytes(final long bytes) {
-        final List<String> powers = List.of("bytes", "KB", "MB", "GB", "TB", "PB", "EB");
-
-        int power = 1;
-        String result = String.format("%d bytes", bytes);
-        while (bytes >= Math.pow(1024, power) && power < powers.size()) {
-            result = String.format("%.3f", bytes / Math.pow(1024, power));
-            result = result.replaceAll("\\.?0*$", "");
-            result = result + " " + powers.get(power);
-            power = power + 1;
-        }
-        return result;
-    }
 }

pdb-api/src/main/java/org/lucares/pdb/api/AbortException.java

@@ -1,5 +1,7 @@
 package org.lucares.pdb.api;
 
+import java.util.concurrent.TimeUnit;
+
 public class AbortException extends RuntimeException {
 
     private static final long serialVersionUID = 7614132985675048490L;
@@ -29,4 +31,18 @@ public class AbortException extends RuntimeException {
         }
     }
 
+    public static void sleepAbortibly(final long millis) throws AbortException {
+        final long deadline = System.currentTimeMillis() + millis;
+
+        while (System.currentTimeMillis() < deadline) {
+            try {
+                TimeUnit.MILLISECONDS.sleep(Math.min(10, deadline - System.currentTimeMillis()));
+            } catch (final InterruptedException e) {
+                Thread.currentThread().interrupt();
+                throw new AbortException();
+            }
+            AbortException.abortIfInterrupted();
+        }
+    }
+
 }

pdb-js/angular.json

@@ -33,7 +33,9 @@
             "styles": [
               "src/styles.scss"
             ],
-            "scripts": []
+            "scripts": [
+              "node_modules/marked/marked.min.js"
+            ]
           },
           "configurations": {
             "production": {

pdb-js/package.json

@@ -23,7 +23,9 @@
     "@angular/platform-browser": "^15.0.2",
     "@angular/platform-browser-dynamic": "^15.0.2",
     "@angular/router": "^15.0.2",
+    "marked": "^4.2.12",
     "moment": "^2.29.1",
+    "ngx-markdown": "^15.1.2",
     "rxjs": "~7.5.0",
     "rxjs-compat": "^6.6.7",
     "tslib": "^2.3.0",
@@ -34,6 +36,7 @@
     "@angular/cli": "^15.0.2",
     "@angular/compiler-cli": "^15.0.2",
     "@types/jasmine": "~3.10.0",
+    "@types/marked": "^4.0.8",
     "@types/node": "^12.11.1",
     "jasmine-core": "~3.10.0",
     "karma": "~6.3.0",

pdb-js/src/app/app.module.ts

@@ -47,6 +47,7 @@ import { CustomizableGridComponent } from './customizable-grid/customizable-grid
 import {DragDropModule} from '@angular/cdk/drag-drop';
 import { ConfirmationDialogComponent } from './confirmation-dialog/confirmation-dialog.component';
 import { FocusDirective } from './focus.directive';
+import { MarkdownModule } from 'ngx-markdown';
 
 @NgModule({
   declarations: [
@@ -77,6 +78,7 @@ import { FocusDirective } from './focus.directive';
     FocusDirective
   ],
   imports: [
+    MarkdownModule.forRoot(),
     BrowserModule,
     AppRoutingModule,
     FormsModule,

pdb-js/src/app/dashboard-page/dashboard/add-plot-dialog/add-plot-dialog.component.html

@@ -14,8 +14,6 @@
     max-height: unset;
   }
 </style>
-<h1 mat-dialog-title>{{data.title}}</h1>
-
 <pdb-visualization-page mat-dialog-content #plot [defaultConfig]="data.config" [galleryEnabled]="false"></pdb-visualization-page>
 
 <div mat-dialog-actions align="end">

pdb-js/src/app/dashboard-page/dashboard/add-text-dialog/add-text-dialog.component.html

@@ -1,6 +1,6 @@
 <style>
   mat-form-field textarea {
-    height: 7em;
+    height: 20em;
   }
 </style>
 <h1 mat-dialog-title>Add Text</h1>
@@ -9,6 +9,7 @@
     <mat-label>Text</mat-label>
     <textarea matInput [(ngModel)]="text" #textElement focus></textarea>
   </mat-form-field>
+  <div>Text field supports <a href="https://spec.commonmark.org/" target="_blank" rel="noopener">Markdown</a>.</div>
 </div>
 <div mat-dialog-actions align="end">
   <button mat-button mat-dialog-close (click)="close()">Cancel</button>

pdb-js/src/app/dashboard-page/dashboard/dashboard.component.html

@@ -26,6 +26,15 @@
     flex-direction: column;
   }
 
+  .editable-hovered {
+    visibility: hidden;
+  }
+
+  .editable:hover .editable-hovered{
+    visibility: visible;
+  }
+
+
   .handle {
     display: block;
     height: 1.5em;

pdb-js/src/app/dashboard-page/dashboard/dashboard.component.ts

@@ -40,7 +40,8 @@ export class DashboardComponent implements OnInit {
           this.repairArrangement();
 
           dashboard.plots.forEach(p => {
-            this.plotWidgetRenderData.push(new PlotWidgetRenderData(p));
+            const submitterId = (<any>window).submitterId + (<any>window).randomId();
+            this.plotWidgetRenderData.push(new PlotWidgetRenderData(p, submitterId));
           });
 
           this.loadImages(0, this.plotWidgetRenderData);
@@ -64,17 +65,25 @@ export class DashboardComponent implements OnInit {
   loadImages(index: number, plotWidgetQueue: PlotWidgetRenderData[]) {
 
     if (index < plotWidgetQueue.length){
+
       const plot = plotWidgetQueue[index];
-      const request = PlotWidget.createPlotRequest(plot.widget);
-      this.plotService.sendPlotRequest(request).subscribe({
-        next: (response: PlotResponse)=> {
-          plot.plotResponse= response;
-        },
-        error: (error:any)=> {},
-        complete: () => {
-          this.loadImages(index +1 , plotWidgetQueue);
-        }
-      });
+      if (plot.isAborted) {
+        this.loadImages(index +1 , plotWidgetQueue);
+      }else{
+        const request = PlotWidget.createPlotRequest(plot.widget, plot.submitterId);
+        this.plotService.sendPlotRequest(request).subscribe({
+          next: (response: PlotResponse)=> {
+            plot.plotResponse= response;
+          },
+          error: (error:any)=> {
+            plot.error = error;
+            this.loadImages(index +1 , plotWidgetQueue);
+          },
+          complete: () => {
+            this.loadImages(index +1 , plotWidgetQueue);
+          }
+        });
+      }
     }
   }
 
@@ -119,7 +128,7 @@ export class DashboardComponent implements OnInit {
 
   addPlot() {
     this.dialog.open(AddPlotDialogComponent,{
-      data: {title: "Add Plot"},
+      data: {},
       width: 'calc(100% - 1em)',
       height: 'calc(100% - 1em)'
     }).afterClosed().subscribe((config: PlotConfig | "") => {
@@ -127,7 +136,7 @@ export class DashboardComponent implements OnInit {
         const widget = new PlotWidget((<any>window).randomId(), 'MEDIUM', config);
         this.dashboard!.plots.push(widget);
         this.dashboard!.arrangement[0].push(widget.id);
-        this.plotWidgetRenderData.push(new PlotWidgetRenderData(widget));
+        this.plotWidgetRenderData.push(new PlotWidgetRenderData(widget, (<any>window).randomId()));
         this.loadImages(this.plotWidgetRenderData.length-1, this.plotWidgetRenderData);
       }
     });

pdb-js/src/app/dashboard-page/dashboard/plot-widget/plot-widget.component.html

@@ -16,7 +16,7 @@
     width: 402px;
     height: 302px;
   }
-  img {
+  img.render-img {
     cursor: zoom-in;
   }
 
@@ -38,16 +38,51 @@
   .dashboard-card:hover .editable-hovered {
     visibility: visible;
   }
+
+  .aborted-img {
+    flex-grow: 0.3;
+    opacity: 0.3;
+  }
+  .aborted-img img {
+    width: 100%;
+  }
+
+  .invader {
+    background: url(data:image/png;base64,iVBORw0KGgoAAAANSUhEUgAAABoAAAAUCAYAAACTQC2+AAAAAXNSR0IArs4c6QAAAAZiS0dEAP8A/wD/oL2nkwAAAAlwSFlzAAALEwAACxMBAJqcGAAAAAd0SU1FB9kKGRAxBENShygAAAAZdEVYdENvbW1lbnQAQ3JlYXRlZCB3aXRoIEdJTVBXgQ4XAAAAbUlEQVRIx9WVQQrAMAgEM6X///L2FCihYvRg7F416LCsQdKo0DWKZA4CBGzjev1lRHgezS0lkan3IYr485ZFdo5oJZkbWoRWfSWrJ8p6suvZucsgCS8THsHX+zKiO5uLaO763bpobvoS/e6HfQBzIE0PhAsDxgAAAABJRU5ErkJggg==);
+    width: 26px;
+    height: 20px;
+    display: inline-block;
+    vertical-align: text-bottom;
+  }
+  .spinner {
+    animation: wobble 2s linear infinite;
+  }
+  @keyframes wobble {
+    0% {
+      opacity: 1;
+    }
+    50% {
+      opacity: 0.3;
+    }
+    100% {
+      opacity: 1;
+    }
+  }
 </style>
 <div class="dashboard-card" [ngClass]="{'size-medium' : true}">
   <div class="editable-hovered top-right">
     <button mat-icon-button (click)="edit()" ><img src="/assets/img/edit-outline.svg"/></button>
     <button mat-icon-button (click)="delete()"><img src="/assets/img/recycle-bin-line.svg"/></button>
   </div>
-  <mat-spinner *ngIf="!hasRender('main') && !isError"></mat-spinner>
-  <img *ngIf="hasRender('main')" [src]="getImageUrl('main')" (click)="showFullScreenImage()" />
-  <div *ngIf="isError">
+  <div *ngIf="!hasRender('main') && !data?.error && !data.isAborted">
+    <button mat-button (click)="abort()"><span class="invader spinner"></span>Cancel</button>    
+  </div>
+  <img *ngIf="hasRender('main')" [src]="getImageUrl('main')" (click)="showFullScreenImage()"  class="render-img" />
+  <div *ngIf="data?.error && !data?.isAborted">
     There was an error! This is a good time to panic!
   </div>
+  <div *ngIf="data?.isAborted" class="aborted-img">
+    <img src="assets/img/image-aborted.svg" />
+  </div>
 </div>
 

pdb-js/src/app/dashboard-page/dashboard/plot-widget/plot-widget.component.ts

@@ -17,7 +17,6 @@ export class PlotWidgetComponent  {
 
   public thumbnailUrl = "";
 
-  isError = false;
 
   @ViewChild("plotView") plotView!: PlotViewComponent;
 
@@ -45,6 +44,17 @@ export class PlotWidgetComponent  {
     });
   }
 
+  abort(){
+    window.console.log("abort");
+    this.data.isAborted = true;
+    this.service.abort(this.data.submitterId).subscribe({
+      complete: () => {
+        window.console.log("cancelled");
+      },
+      error: () => {}
+    });
+  }
+
   delete() {
     this.dialog
       .open(ConfirmationDialogComponent, {
@@ -60,23 +70,23 @@ export class PlotWidgetComponent  {
 
   edit() {
     this.dialog.open(AddPlotDialogComponent, {
-      data: {config: this.data.widget.config, title:"Edit Plot"},
+      data: {config: this.data.widget.config},
       width: 'calc(100% - 15px)',
       height: 'calc(100% - 15px)',
     }).afterClosed().subscribe((config?: PlotConfig) => {
       if (config !== undefined && config.query.length > 0) {
         this.data.widget.config = config;
 
-        this.isError = false;
+        this.data.error = false;
         this.data.plotResponse = undefined;
 
-        const request = PlotWidget.createPlotRequest(this.data.widget);
+        const request = PlotWidget.createPlotRequest(this.data.widget, this.data.submitterId);
         this.service.sendPlotRequest(request).subscribe({
           next: (response: PlotResponse)=> {
             this.data.plotResponse = response;
           },
           error: (error:any)=> {
-            this.isError = true;
+            this.data.error = true;
           },
         });
       }

pdb-js/src/app/dashboard-page/dashboard/text-widget/text-widget.component.html

@@ -29,5 +29,5 @@
     <button mat-icon-button (click)="edit()"><img src="/assets/img/edit-outline.svg"/></button>
     <button mat-icon-button (click)="delete()"><img src="/assets/img/recycle-bin-line.svg"/></button>
   </div>
-  <p *ngFor="let line of lines()">{{line}}</p>
+  <markdown [data]="this.data.text"></markdown>
 </div>

pdb-js/src/app/dashboard.service.ts

@@ -68,7 +68,7 @@ export class PlotWidget extends BaseWidget {
     super(id, 'PLOT', size);
   }
 
-  public static createPlotRequest(widget: PlotWidget): PlotRequest {
+  public static createPlotRequest(widget: PlotWidget, submitterId: string): PlotRequest {
     
     const height = this.height(widget.size);
     const width  = this.width(widget.size);
@@ -77,7 +77,7 @@ export class PlotWidget extends BaseWidget {
     const fullHeight = window.innerHeight-30;
 
     const request = new PlotRequest(
-      (<any>window).submitterId+(<any>window).randomId(),
+      submitterId,
       widget.config, 
       {
         'main': new RenderOptions(height,width, false, true),
@@ -115,7 +115,9 @@ export type PlotSize = 'SMALL'|'MEDIUM'|'LARGE';
 export type PlotType = 'TEXT'|'PLOT';
 
 export class PlotWidgetRenderData  {
-  constructor(public widget: PlotWidget, public plotResponse?: PlotResponse) {
+  public isAborted = false;
+  public error: string|boolean = false;
+  constructor(public widget: PlotWidget, public submitterId: string, public plotResponse?: PlotResponse) {
   }
 }
 

pdb-js/src/app/visualization-page/visualization-page.component.html

@@ -12,8 +12,6 @@
   
   <div id="filters">
     <div id="filterpanel">
-      
-
       <mat-form-field class="pdb-form-full-width">
         <mat-label>Type:</mat-label>
         <mat-select  multiple [(ngModel)]="selectedPlotType" (ngModelChange)="changePlotType($event)">
@@ -52,7 +50,7 @@
      <pdb-y-axis-definition #y1AxisDefinitionComponent yIndex="1"></pdb-y-axis-definition>
      <pdb-y-axis-definition #y2AxisDefinitionComponent yIndex="2" [hidden]="!y2AxisAvailable"></pdb-y-axis-definition>
      
-     <mat-checkbox *ngIf="galleryEnabled" [(ngModel)]="enableGallery">Gallery</mat-checkbox>
+     <mat-checkbox *ngIf="galleryEnabled" [(ngModel)]="enableGallery" (click)="toggleGallery($event)">Gallery</mat-checkbox>
      
      <mat-form-field *ngIf="enableGallery" class="pdb-form-full-width">
         <mat-label>Split By:</mat-label>
@@ -66,6 +64,13 @@
      
      
       <div id="plot-button-bar">
+        <a 
+          mat-icon-button 
+          [routerLink]="['/vis']"
+          [queryParams]="{config: serializedConfig()}"
+          target="_blank"
+          aria-label="open new window with the same search"
+          title="open new window with the same search"><img src="assets/img/link.svg" aria-hidden="true"/></a>
         <button 
         *ngIf="!enableGallery && !plotJobActive"
         [disabled]="plotJobActive"

pdb-js/src/app/visualization-page/visualization-page.component.scss

@@ -67,5 +67,7 @@
 }
 
 #plot-button-bar {
-  text-align: right;
+  display: flex;
+  justify-content: space-between;
 }
+

pdb-js/src/app/visualization-page/visualization-page.component.ts

@@ -63,6 +63,12 @@ export class VisualizationPageComponent implements OnInit, AfterViewInit {
   plotJobActive = false;
 
   constructor(private plotService: PlotService, private snackBar: MatSnackBar) {
+
+    const params = new URLSearchParams(window.location.search);
+    if (!this.defaultConfig && params.get("config")) {
+      const config = JSON.parse(params.get("config")!);
+      this.defaultConfig = config;
+    }
   }
 
   showError(message:string) {
@@ -96,8 +102,6 @@ export class VisualizationPageComponent implements OnInit, AfterViewInit {
         this.plot();
       }
     });  
-
-
   }
 
 ngAfterViewInit(): void {
@@ -128,6 +132,10 @@ ngAfterViewInit(): void {
   }
 }
 
+toggleGallery(event: Event){
+  this.galleryView.show = this.enableGallery;
+}
+
   loading(event: LoadingEvent) {
     this.plotJobActive = event.loading;
   }
@@ -246,4 +254,13 @@ ngAfterViewInit(): void {
       );
     return request;
   }
+
+  serializedConfig(): string {
+    try{
+    const config = this.createPlotConfig();
+    return JSON.stringify(config);
+    }catch (e)  {
+      return "";
+    }
+  }
 }

pdb-js/src/app/y-axis-definition/y-axis-definition.component.html

@@ -11,11 +11,15 @@
       <mat-form-field class="pdb-form-mid">
         <mat-label>Y{{yIndex}}-Axis Unit:</mat-label>
         <mat-select [(value)]="yAxisUnit">
-          <mat-optgroup label="⸺numbers⸺">
+          <mat-optgroup label="—numbers—">
             <mat-option value="AUTOMATIC_NUMBER">auto (number)</mat-option>
             <mat-option value="NO_UNIT">no unit</mat-option>
           </mat-optgroup>
-          <mat-optgroup label="⸺time⸺">
+          <mat-optgroup label="—bytes—">
+            <mat-option value="AUTOMATIC_BYTES">auto (bytes)</mat-option>
+            <mat-option value="BYTES">bytes</mat-option>
+          </mat-optgroup>
+          <mat-optgroup label="—time—">
             <mat-option value="AUTOMATIC_TIME">auto (time)</mat-option>
             <mat-option value="MILLISECONDS">millis</mat-option>
             <mat-option value="SECONDS">seconds</mat-option>
@@ -25,11 +29,11 @@
           </mat-optgroup>
         </mat-select>
       </mat-form-field>
-      <mat-form-field *ngIf="yAxisUnit !== 'AUTOMATIC_TIME' && yAxisUnit !== 'AUTOMATIC_NUMBER'" class="pdb-form-number">
+      <mat-form-field *ngIf="yAxisUnit !== 'AUTOMATIC_TIME' && yAxisUnit !== 'AUTOMATIC_NUMBER' && yAxisUnit !== 'AUTOMATIC_BYTES'" class="pdb-form-number">
         <mat-label>Min:</mat-label>
         <input matInput type="number" placeholder="Min" min="0" [(ngModel)]="minYValue">
       </mat-form-field>
-      <mat-form-field *ngIf="yAxisUnit !== 'AUTOMATIC_TIME' && yAxisUnit !== 'AUTOMATIC_NUMBER'" class="pdb-form-number">
+      <mat-form-field *ngIf="yAxisUnit !== 'AUTOMATIC_TIME' && yAxisUnit !== 'AUTOMATIC_NUMBER' && yAxisUnit !== 'AUTOMATIC_BYTES'" class="pdb-form-number">
         <mat-label>Max:</mat-label>
         <input matInput type="number" placeholder="Max" min="0" [(ngModel)]="maxYValue">
       </mat-form-field>

pdb-js/src/assets/img/bookmark-add-line.svg

@@ -0,0 +1 @@
+<svg xmlns="http://www.w3.org/2000/svg" enable-background="new 0 0 24 24" height="24" viewBox="0 0 24 24" width="24"><rect fill="none" height="24" width="24"/><path d="M17,11v6.97l-5-2.14l-5,2.14V5h6V3H7C5.9,3,5,3.9,5,5v16l7-3l7,3V11H17z M21,7h-2v2h-2V7h-2V5h2V3h2v2h2V7z"/></svg>

pdb-js/src/assets/img/bookmark-line.svg

@@ -0,0 +1 @@
+<svg xmlns="http://www.w3.org/2000/svg" height="24" viewBox="0 0 24 24" width="24"><path d="M0 0h24v24H0V0z" fill="none"/><path d="M17 3H7c-1.1 0-2 .9-2 2v16l7-3 7 3V5c0-1.1-.9-2-2-2zm0 15l-5-2.18L7 18V5h10v13z"/></svg>

pdb-js/src/assets/img/bookmarks-line.svg

@@ -0,0 +1 @@
+<svg xmlns="http://www.w3.org/2000/svg" height="24" viewBox="0 0 24 24" width="24"><path d="M0 0h24v24H0V0z" fill="none"/><path d="M15 7v12.97l-4.21-1.81-.79-.34-.79.34L5 19.97V7h10m4-6H8.99C7.89 1 7 1.9 7 3h10c1.1 0 2 .9 2 2v13l2 1V3c0-1.1-.9-2-2-2zm-4 4H5c-1.1 0-2 .9-2 2v16l7-3 7 3V7c0-1.1-.9-2-2-2z"/></svg>

pdb-js/src/assets/img/image-aborted.svg

@@ -0,0 +1,5 @@
+<svg xmlns="http://www.w3.org/2000/svg" width="64" height="64" shape-rendering="geometricPrecision" text-rendering="geometricPrecision" image-rendering="optimizeQuality" fill-rule="evenodd" clip-rule="evenodd" viewBox="-30 -30 700 700">
+<path d="M-.012 65.611h640.024v508.778H-.012V65.611zm180.026 132.273c22.996 0 41.635 18.638 41.635 41.634 0 22.997-18.638 41.635-41.635 41.635-22.996 0-41.634-18.638-41.634-41.635 0-22.996 18.638-41.634 41.634-41.634zm175.207 178.679l83.269-143.978 88.466 223.763h-412.86v-27.756l34.702-1.725 34.69-85.005 17.338 60.722h52.052l45.095-116.222 57.248 90.201zM47.528 107.764h544.944v424.47H47.528v-424.47z"/>
+
+<line x1="10" y1="630" x2="630" y2="10" style="stroke:#000; stroke-width: 60px; stroke-linecap: round;" />
+</svg>

pdb-js/src/assets/img/launch.svg

@@ -0,0 +1 @@
+<svg xmlns="http://www.w3.org/2000/svg" height="24" viewBox="0 0 24 24" width="24"><path d="M0 0h24v24H0z" fill="none"/><path d="M19 19H5V5h7V3H5c-1.11 0-2 .9-2 2v14c0 1.1.89 2 2 2h14c1.1 0 2-.9 2-2v-7h-2v7zM14 3v2h3.59l-9.83 9.83 1.41 1.41L19 6.41V10h2V3h-7z"/></svg>

pdb-js/src/assets/img/move.svg

@@ -0,0 +1 @@
+<svg xmlns="http://www.w3.org/2000/svg" width="512" height="512" viewBox="0 0 512 512"><title>ionicons-v5-g</title><polyline points="176 112 256 32 336 112" style="fill:none;stroke:#000;stroke-linecap:round;stroke-linejoin:round;stroke-width:32px"/><line x1="255.98" y1="32" x2="256" y2="480" style="fill:none;stroke:#000;stroke-linecap:round;stroke-linejoin:round;stroke-width:32px"/><polyline points="176 400 256 480 336 400" style="fill:none;stroke:#000;stroke-linecap:round;stroke-linejoin:round;stroke-width:32px"/><polyline points="400 176 480 256 400 336" style="fill:none;stroke:#000;stroke-linecap:round;stroke-linejoin:round;stroke-width:32px"/><polyline points="112 176 32 256 112 336" style="fill:none;stroke:#000;stroke-linecap:round;stroke-linejoin:round;stroke-width:32px"/><line x1="32" y1="256" x2="480" y2="256" style="fill:none;stroke:#000;stroke-linecap:round;stroke-linejoin:round;stroke-width:32px"/></svg>

pdb-js/src/assets/img/resize.svg

@@ -0,0 +1 @@
+<svg xmlns="http://www.w3.org/2000/svg" width="512" height="512" viewBox="0 0 512 512"><title>ionicons-v5-c</title><polyline points="304 96 416 96 416 208" style="fill:none;stroke:#000;stroke-linecap:round;stroke-linejoin:round;stroke-width:32px"/><line x1="405.77" y1="106.2" x2="111.98" y2="400.02" style="fill:none;stroke:#000;stroke-linecap:round;stroke-linejoin:round;stroke-width:32px"/><polyline points="208 416 96 416 96 304" style="fill:none;stroke:#000;stroke-linecap:round;stroke-linejoin:round;stroke-width:32px"/></svg>

pdb-js/src/assets/img/save-outline.svg

@@ -0,0 +1 @@
+<svg xmlns="http://www.w3.org/2000/svg" width="512" height="512" viewBox="0 0 512 512"><title>ionicons-v5-p</title><path d="M380.93,57.37A32,32,0,0,0,358.3,48H94.22A46.21,46.21,0,0,0,48,94.22V417.78A46.21,46.21,0,0,0,94.22,464H417.78A46.36,46.36,0,0,0,464,417.78V153.7a32,32,0,0,0-9.37-22.63ZM256,416a64,64,0,1,1,64-64A63.92,63.92,0,0,1,256,416Zm48-224H112a16,16,0,0,1-16-16V112a16,16,0,0,1,16-16H304a16,16,0,0,1,16,16v64A16,16,0,0,1,304,192Z" style="fill:none;stroke:#000;stroke-linecap:round;stroke-linejoin:round;stroke-width:32px"/></svg>

pdb-js/src/styles.scss

@@ -190,7 +190,8 @@ mat-form-field.pdb-form-mid {
 mat-form-field.pdb-form-wide {
   width: 10em;
 }
-pdb-visualization-page .mat-mdc-form-field-subscript-wrapper  {
+pdb-visualization-page .mat-mdc-form-field-subscript-wrapper,
+app-add-text-dialog .mat-mdc-form-field-subscript-wrapper  {
   display: none;/**/
 }
 
@@ -207,3 +208,23 @@ pdb-visualization-page .mat-mdc-form-field-subscript-wrapper  {
   top: 0.2em;
   line-height: 1em;
 }
+
+a[target="_blank"]:after {
+  content: "";
+  display: inline-block;
+  background: url("assets/img/external-link.svg") no-repeat;
+  background-size: 1em;
+  width: 1em;
+  height: 1em;
+  margin-left: 0.3em;
+  vertical-align: text-top;
+}
+
+
+/* styles for markdown*/
+markdown blockquote {
+  border-left: 4px grey solid;
+  display: block;
+  margin-left: 2em;
+  padding-left: 0.5em;
+}

pdb-plotting/src/main/java/org/lucares/pdb/plot/api/RangeUnit.java

@@ -7,6 +7,8 @@ public enum RangeUnit {
 
     NO_UNIT(false, Type.Number, "Value"),
 
+    AUTOMATIC_BYTES(true, Type.Number, "Value"),
+
     BYTES(false, Type.Number, "Value"),
 
     AUTOMATIC_TIME(true, Type.Duration, "Duration"),
@@ -43,6 +45,10 @@ public enum RangeUnit {
         return type == Type.Number || type == Type.HistogramCount;
     }
 
+    public boolean isBytes() {
+        return this == BYTES || this == AUTOMATIC_BYTES;
+    }
+
     public String getLabel() {
         return axisLabel;
     }
@@ -51,11 +57,9 @@ public enum RangeUnit {
         return type;
     }
 
-    public int valueForUnit(final int value) {
+    public long valueForUnit(final long value) {
 
         switch (this) {
-        case AUTOMATIC_NUMBER:
-            return Integer.MAX_VALUE;
         case NO_UNIT:
         case BYTES:
             return value;
@@ -69,10 +73,12 @@ public enum RangeUnit {
             return value * 60 * 60 * 1000;
         case DAYS:
             return value * 24 * 60 * 60 * 1000;
+        case AUTOMATIC_NUMBER:
         case AUTOMATIC_TIME:
-            return Integer.MAX_VALUE;
+        case AUTOMATIC_BYTES:
+            return Long.MAX_VALUE;
         }
-        return Integer.MAX_VALUE;
+        return Long.MAX_VALUE;
     }
 
 }

pdb-plotting/src/main/java/org/lucares/pdb/plot/api/YAxisDefinition.java

@@ -3,8 +3,8 @@ package org.lucares.pdb.plot.api;
 public class YAxisDefinition {
     private AxisScale axisScale = AxisScale.LINEAR;
 
-    private int rangeMin = 0;
-    private int rangeMax = 300;
+    private long rangeMin = 0;
+    private long rangeMax = 300;
     private RangeUnit rangeUnit = RangeUnit.AUTOMATIC_TIME;
 
     public AxisScale getAxisScale() {
@@ -23,7 +23,7 @@ public class YAxisDefinition {
         return rangeUnit.valueForUnit(rangeMax);
     }
 
-    public int getRangeMin() {
+    public long getRangeMin() {
         return rangeMin;
     }
 
@@ -31,15 +31,15 @@ public class YAxisDefinition {
         return !rangeUnit.isAutomatic() && rangeMin >= 0 && rangeMax >= 0 && rangeMin < rangeMax;
     }
 
-    public void setRangeMin(final int rangeMin) {
+    public void setRangeMin(final long rangeMin) {
         this.rangeMin = rangeMin;
     }
 
-    public int getRangeMax() {
+    public long getRangeMax() {
         return rangeMax;
     }
 
-    public void setRangeMax(final int rangeMax) {
+    public void setRangeMax(final long rangeMax) {
         this.rangeMax = rangeMax;
     }
 

pdb-plotting/src/main/java/org/lucares/recommind/logs/YAxisTicks.java

@@ -13,6 +13,7 @@ import java.util.Locale;
 import java.util.concurrent.TimeUnit;
 
 import org.lucares.pdb.plot.api.YAxisDefinition;
+import org.lucares.utils.HumanBytes;
 
 class YAxisTicks {
 
@@ -45,6 +46,17 @@ class YAxisTicks {
             default:
                 throw new IllegalStateException("unhandled value: " + yAxisDefinition.getRangeUnit());
             }
+        } else if (yAxisDefinition.getRangeUnit().isBytes()) {
+            switch (yAxisDefinition.getAxisScale()) {
+            case LINEAR:
+                result = computeLinearYTicksByte(height, yRangeMin, yRangeMax);
+                break;
+            case LOG10:
+                result = computeLog10YTicksByte(height, yRangeMin, yRangeMax);
+                break;
+            default:
+                throw new IllegalArgumentException("Unexpected value: " + yAxisDefinition.getAxisScale());
+            }
         } else {
             switch (yAxisDefinition.getAxisScale()) {
             case LINEAR:
@@ -59,6 +71,33 @@ class YAxisTicks {
         return result;
     }
 
+    private static double log2(final double d) {
+        return Math.log10(d) / Math.log10(2);
+    }
+
+    private static List<String> computeLog10YTicksByte(final int height, final long yRangeMin, final long yRangeMax) {
+
+        final int fontHeight = GnuplotSettings.TICKS_FONT_SIZE * 2;
+        final long plotHeight = height - GnuplotSettings.GNUPLOT_TOP_BOTTOM_MARGIN;
+        final int heightPerPowerOf2 = (int) Math.ceil(plotHeight / log2(yRangeMax));
+
+        final List<String> ticsLabels = new ArrayList<>();
+
+        long nextFreePositionOnYAxis = 0;
+        int count = 1;
+        for (long v = 1; v <= yRangeMax * 10; v *= 2) // increase yRangeMax by factor 10, because Gnuplot uses the next
+                                                      // log10 value when scaling the y-axis
+        {
+            if (nextFreePositionOnYAxis < count * heightPerPowerOf2) {
+                ticsLabels.add("\"" + HumanBytes.toHumanBytes(v) + "\" " + v);
+                nextFreePositionOnYAxis = count * heightPerPowerOf2 + fontHeight;
+            }
+            count++;
+        }
+
+        return ticsLabels;
+    }
+
     private static List<String> computeLog10YTicksTime(final int height, final long yRangeMin, final long yRangeMax) {
 
         final List<String> ticsLabels = Arrays.asList(//
@@ -100,6 +139,52 @@ class YAxisTicks {
         return ticsLabels;
     }
 
+    private static List<String> computeLinearYTicksByte(final long height, final long yRangeMinInMs,
+            final long yRangeMaxInMs) {
+        final long plotHeight = height - GnuplotSettings.GNUPLOT_TOP_BOTTOM_MARGIN;
+        final long maxLabels = plotHeight / (GnuplotSettings.TICKS_FONT_SIZE * 2);
+
+        final long range = yRangeMaxInMs - yRangeMinInMs;
+        final long rangePerLabel = roundToNextLinearByteStep(range / maxLabels);
+
+        final List<String> ticsLabels = new ArrayList<>();
+        for (long i = yRangeMinInMs; i <= yRangeMaxInMs; i += rangePerLabel) {
+            ticsLabels.add("\"" + byteToTic(i, rangePerLabel) + "\" " + i);
+        }
+
+        return ticsLabels;
+    }
+
+    private static long roundToNextLinearByteStep(final long stepSize) {
+        final List<Long> steps = Arrays.asList(1L, 2L, 4L, 8L, 16L, 32L, 64L, 128L, 256L, 512L,
+
+                HumanBytes.KB, HumanBytes.KB * 5, HumanBytes.KB * 10, HumanBytes.KB * 50, HumanBytes.KB * 100,
+                HumanBytes.KB * 128, HumanBytes.KB * 256, HumanBytes.KB * 512,
+
+                HumanBytes.MB, HumanBytes.MB * 5, HumanBytes.MB * 10, HumanBytes.MB * 50, HumanBytes.MB * 100,
+                HumanBytes.MB * 128, HumanBytes.MB * 256, HumanBytes.MB * 512,
+
+                HumanBytes.GB, HumanBytes.GB * 5, HumanBytes.GB * 10, HumanBytes.GB * 50, HumanBytes.GB * 100,
+                HumanBytes.GB * 128, HumanBytes.GB * 256, HumanBytes.GB * 512,
+
+                HumanBytes.TB, HumanBytes.TB * 5, HumanBytes.TB * 10, HumanBytes.TB * 50, HumanBytes.TB * 100,
+                HumanBytes.TB * 128, HumanBytes.TB * 256, HumanBytes.TB * 512,
+
+                HumanBytes.PB, HumanBytes.PB * 5, HumanBytes.PB * 10, HumanBytes.PB * 50, HumanBytes.PB * 100,
+                HumanBytes.PB * 128, HumanBytes.PB * 256, HumanBytes.PB * 512,
+
+                HumanBytes.EB, HumanBytes.EB * 5, HumanBytes.EB * 10, HumanBytes.EB * 50, HumanBytes.EB * 100,
+                HumanBytes.EB * 128, HumanBytes.EB * 256, HumanBytes.EB * 512);
+
+        for (final Long step : steps) {
+            if (stepSize < step) {
+                return step;
+            }
+        }
+
+        return stepSize;
+    }
+
     private static List<String> computeLinearYTicksTime(final long height, final long yRangeMinInMs,
             final long yRangeMaxInMs) {
 
@@ -156,6 +241,10 @@ class YAxisTicks {
         return msPerLabel;
     }
 
+    private static String byteToTic(final long val, final double rangePerLabel) {
+        return HumanBytes.toHumanBytes(val);
+    }
+
     private static String msToTic(final long ms, final double msPerLabel) {
 
         if (ms < 1000) {

pdb-utils/src/main/java/org/lucares/utils/HumanBytes.java

@@ -0,0 +1,32 @@
+package org.lucares.utils;
+
+import java.util.List;
+
+public class HumanBytes {
+
+    public static final long KB = 1024;
+
+    public static final long MB = KB * 1024;
+
+    public static final long GB = MB * 1024;
+
+    public static final long TB = GB * 1024;
+
+    public static final long PB = TB * 1024;
+
+    public static final long EB = TB * 1024;
+
+    public static String toHumanBytes(final long bytes) {
+        final List<String> powers = List.of("bytes", "KB", "MB", "GB", "TB", "PB", "EB");
+
+        int power = 1;
+        String result = String.format("%d bytes", bytes);
+        while (bytes >= Math.pow(1024, power) && power < powers.size()) {
+            result = String.format("%.3f", bytes / Math.pow(1024, power));
+            result = result.replaceAll("\\.?0*$", "");
+            result = result + " " + powers.get(power);
+            power = power + 1;
+        }
+        return result;
+    }
+}