Commit Graph
100 Commits
Author SHA1 Message Date
andi da97a13ed8 add new ranges for date picker 2019-08-25 10:40:05 +02:00
andi 2cd0d71dde fix compile error in Eclipse
Eclipse marked this as an error. A Gradle build had
no issue.
2019-08-25 10:26:39 +02:00
andi 5b57417f75 make the tics on the y-axis easier readable
People are having trouble to understand durations like
100000 or 2.7E+6 milliseconds. Therefore we are
hanging the labels on the y-axis to include the unit
in the tic's label. We also use multiples of seconds,
minutes, hours and days instead of multiples of 10.
2019-08-25 10:25:47 +02:00
andi 4e9b556ea9 update third-party libs 2019-08-24 19:59:06 +02:00
andi 3a7688d1ae remember next eviction time and skip eviction 2019-08-24 19:39:59 +02:00
andi 6eaf4e10fc add maxSize parameter to HotEntryCache 2019-08-24 19:24:20 +02:00
andi 00c20dae6b use long instead of Instant for time
Working with longs is faster and requires less
cache. The space in L123 caches is precious.
2019-08-19 18:58:24 +02:00
andi feda901f6d remove event types
We only have removal events. The additional complexity
of having a generic interface for many different event
types does not pay off.
2019-08-18 20:30:25 +02:00
andi 4d9ea6d2a8 switch back to my own HotEntryCache implementation
Guava's cache does not evict elements reliably by
time. Configure a cache to have a lifetime of n
seconds, then you cannot expect that an element is
actually evicted after n seconds with Guava.
2019-08-18 20:14:14 +02:00
andi 427d7818bf update gradle and commons-collections 2019-08-01 18:54:52 +02:00
andi 574a9c9cc4 update jquery to 3.4.1 2019-07-04 19:12:54 +02:00
andi a8d77562c9 update daterangepicker to 3.0.5 2019-07-04 19:11:00 +02:00
andi 2cb81e5acd make it possible to ignore columns using the csv ingestor 2019-07-04 09:51:33 +02:00
andi 3a39f66e22 update 3rd party libs 2019-07-04 09:06:06 +02:00
andi 58f988f378 update gradle to 5.5 2019-07-04 09:01:39 +02:00
andi 4f57a29c3b increase cache of stringified longs
This should improve the csv generation a little bit.
2019-05-25 17:55:14 +02:00
andi 1be57dce0c update spring and jackson 2019-05-25 17:53:54 +02:00
andi 2eb2a69c17 rename 'percentile' plots to 'cumulative distribution' 2019-05-12 14:30:16 +02:00
andi 1f144846db update 3rd party libs and gradle 2019-04-28 14:40:43 +02:00
andi 9fb1a136c8 cache last used date prefix
The 99.9999% use case is to ingest data
from the same month.
2019-04-22 09:51:44 +02:00
andi dfe9579726 use DateTimeRange.max() instead of arbitrary relative range 2019-04-20 20:36:26 +02:00
andi d82b33c60e update js libraries 2019-04-20 20:31:51 +02:00
andi 7277670b8b update 3rd party libs 2019-04-20 20:19:24 +02:00
andi 9525ee22a0 add access restrictions for a few unwelcome classes 2019-04-20 20:12:45 +02:00
andi 56085061ed do not return anything if the field/value does not exist
The computation of proposals is done by searching for values in a
combined index. If one of the values didn't exist, then the algorithm
returned all values. Fixed by checking that we query only existing
field/values from the combined index.
2019-04-20 19:48:51 +02:00
andi dbe0e02517 rename cluster to partition
We are not clustering the indices, we
are partitioning them.
2019-04-14 10:10:16 +02:00
andi 2a1885a77f cluster the indices 2019-03-31 09:01:55 +02:00
andi 95f2f26966 handle IOExceptions earlier 2019-03-17 11:13:46 +01:00
andi 5d0ceb112e add clustering for DiskStore 2019-03-17 10:53:02 +01:00
andi b5e2d0a217 introduce clustering for query completion indices 2019-03-16 10:19:28 +01:00
andi fb9f8592ac make ClusteredPersistentMap easier to use 2019-02-24 19:20:44 +01:00
andi 59aea1a15f introduce index clustering (part 1)
In order to prevent files from getting too big and
make it easier to implement retention policies, we
are splitting all files into chunks. Each chunk
contains the data for a time interval (1 month per
default).
This first changeset introduces the ClusteredPersistentMap
that implements this for PersistentMap. It is used
for a couple (not all) of indices.
2019-02-24 16:50:57 +01:00
andi 372a073b6d PdbWriter is no longer in the API of DataStore 2019-02-16 16:24:14 +01:00
andi 92a47d9b56 remove TagsToFile
Remove one layer of abstraction by moving the code into the DataStore.
2019-02-16 16:06:46 +01:00
andi 117ef4ea34 use guava's cache as implementation for the HotEntryCache
My own implementation was faster, but was not able to
implement a size limitation.
2019-02-16 10:23:52 +01:00
andi 7b00eede86 refactoring: extract EncoderDecoders from DataStore 2019-02-16 09:16:15 +01:00
andi cbcb7714bb split BSFile into a TimeSeries and a LongStream file
BSFile was used to store two types of data. This makes
the API complex. I split the API into two files with
easier and more clear APIs. Interestingly the API of
BSFile is still rather complex and has to consider both
use cases.
2019-02-10 09:59:16 +01:00
andi fd55ea0866 update vuejs to 2.6.4
Added the version to moment.min.js
2019-02-09 15:39:28 +01:00
andi 93dea402a5 remove obsolete class 2019-02-09 15:25:39 +01:00
andi 27b83234cc group proposal as if they were hierarchical
We interpret dots ('.') as hierarchy delimiter in.
That way we can reduce the number of proposed values
and show only those for the next level.
2019-02-09 15:21:35 +01:00
andi 493971bcf3 values used in queries were added to the keys.csv
Due to a mistake in Tag which added all strings used
by Tag into the String dictionary, the dictionary
did contain all values that were used in queries.
2019-02-09 08:28:23 +01:00
andi ea5884a5e6 move creation of PdbWriter to the DataStore 2019-02-07 18:06:41 +01:00
andi 668d73c926 introduced a new custom file format used for backup and ingestion
The new file format reduces repetition, is easy to parse,
easy to generate in any language and is human readable.
2019-02-03 15:44:35 +01:00
andi 1d8ca0e21c fetch org.lucares artifacts only from repo.lucares.de 2019-02-02 17:51:20 +01:00
andi c0fffbf676 update third party libs
gradle to 5.1.1
spring-boot to 2.1.2.RELEASE
antlr to 4.7.2
jackson to 2.9.8
2019-02-02 17:33:21 +01:00
andi 2e48061793 add LRU cache to PersistentMap
This should speed up fetching and inserting of values
that are used often.
2019-02-02 17:26:25 +01:00
andi d4d1685f9f replace stdout with logger 2019-02-02 16:49:21 +01:00
andi 151e9363e1 remove obsolete classes 2019-02-02 16:45:34 +01:00
andi 76e5d441de rewrite query completion
The old implementation searched for all possible values and then
executed each query to see what matches.
The new implementation uses several indices to find only
the matching values.
2019-02-02 15:35:56 +01:00
andi 72e9a9ebe3 prepare more efficient query completion
adding an index that answers the question
given a query "a=b and c=", what are possible values
for c.
2019-01-13 10:22:17 +01:00
andi 5197063ae3 the union of many small lists is expensive
The reason seems to be the number of memory allocations. In order
to create the union of 100 lists we have 99 memory allocations.
The first needs the space for the first two lists, the second the
space for the first three lists, and so on.

We can reduce the number of allocations drastically (in many
cases to one) by leveraging the fact that many of the lists
were already sorted, non-overlapping and increasing, so that
we can simply concatenate them.
2019-01-05 08:52:56 +01:00
andi 3dca7483de utility that generates a csv with many different tags 2019-01-05 08:33:57 +01:00
andi f2d16b6758 make CacheKey comparable
The CacheKey is used as a key in a HashMap. Lookup can
be faster if the CacheKey is comparable when there are
hash collisions.
In this case I was not able to measure any effect. I am
keeping the comparables nonetheless, because the can
only have a positive effect.
2019-01-01 08:47:48 +01:00
andi 4cde10a9f2 read csv using input stream instead of reader
We are now reading the CSV input without transforming
the data into strings. This reduces the amount of bytes
that have to be converted and copied.
We also made Tag smaller. It no longer stores pointers
to strings, instead it stored integers obtained by
compressing the strings (see StringCompressor). This
reduces memory usage and it speeds up hashcode and
equals, which speeds up access to the writer cache.

Performance gain is almost 100%:
- 330k entries/s -> 670k entries/s, top speed measured over a second
- 62s -> 32s, to ingest 16 million entries
2019-01-01 08:31:28 +01:00
andi 0487c30582 use List instead of TreeMap for intToString mapping
UniqueStringIntegerPairs stores mappings of integers
0-n to strings and vice versa. Mapping integers to
strings does not need a TreeMap, it can be done with
a List.
Makes insertions 3 times (when using the in-memory
variant that does not write to disk) and 7 times faster
for int to string mapping.
2018-12-22 10:07:19 +01:00
andi e537e94d39 HotEntryCache will update Instants only once per second
Calling Instant.now() several hundred thousand times per
second can be expensive. In my measurements >10% of the
time spend when loading new data was spend calling
Instant.now().
Fixed this by storing an Instant as static member and
updating it periodically in a separate thread.
2018-12-21 19:16:55 +01:00
andi d95a71e32e batch entries between TcpIngestor and PerformanceDB
One bottleneck was the blocking queue used to transport entries
from the listener thread to the ingestor thread.
Reduced the bottleneck by batching entries.
Interestingly the batch size of 100 was better than batch size
of 1000 and better than 10.
2018-12-21 13:11:35 +01:00
andi 73ad27ab96 remove lastAccessMap
In the last commit I added a lastAccessMap to the HotEntryCache.
This map made it much more efficient to evict entries. But it
also made and put and get operation much more expensive. Overall
that change lead to a 65% decrease in ingestion performance of
the PerformanceDB.
Fixed by removing the map again. Eviction has to look at all
elements again.
2018-12-21 10:28:34 +01:00
andi afba3b6f77 elements not evicted if new elements are added 2018-12-20 16:13:55 +01:00
andi d52bfa0916 remove obsolete class RadixConverter 2018-12-17 19:11:33 +01:00
andi 3a4101bbf9 increase the buffer between ingestion and insertion thread
I was finally able to show that there is a tiny but measureable
effect of this buffer. I think it was not visible before,
because the parsing was too slow. But now, that I replaced the
date parser, the ingestion thread is twice as fast as the
insertion thread. Therefore the buffer makes more sense.
2018-12-17 19:07:55 +01:00
andi d37508b7a1 Pattern.split is faster than StringUtils.splitPreserveAll
Document the fact, so that I do not have to repeat the same
test a third time.
2018-12-17 19:05:34 +01:00
andi 40f4506e13 use FastISODateParser.parseAsEpochMilli
Compared to FastISODateParser.parse, which returns an
OffsetDateTime object, parseAsEpochMilli returns the
epoch time millis. The performance improvement for
date parsing alone is roughly 100% (8m dates/s to
18m dates/s).
Insertion speed improved from 13-14s for 1.6m entries
to 11.5-12.5s.
2018-12-16 19:24:47 +01:00
andi 23f800a441 add date parsing method that returns epochMillis instead of date object 2018-12-16 15:38:26 +01:00
andi 20c555c30a update 3rd party libs and gradle 2018-12-07 14:06:59 +01:00
andi 253bbabd19 cleanup
remove debug output
2018-11-25 07:49:23 +00:00
andi a86a473b4a use unix line breaks 2018-11-25 07:49:04 +00:00
andi 37207d67ab use utf-8 as resource encoding 2018-11-25 07:29:29 +00:00
andi 593752470c cleanup 2018-11-25 07:46:58 +01:00
andi 5404253bc6 use TreeMap in PersistentMapDiskNode instead of list 2018-11-24 15:57:05 +01:00
andi d67e452a91 cache disk blocks in an LRU cache
Improves read access by factor 4 for small trees.
2018-11-24 15:07:37 +01:00
andi 9889252205 use only one thread for evictions
Instead of spawning a new thread for every cache, we use a single thread
that will evict entries from all caches.
The thread keeps a weak reference to the caches, so that they can be
garbage collected.
2018-11-24 08:32:05 +01:00
andi 64771417e4 only iterates over elements when at least one element can be evicted 2018-11-23 07:23:38 +01:00
andi f78f69328b add cache for docId to Doc mapping
A Doc does not change once it is created, so it is easy to cache.
Speedup was from 1ms per Doc to 3ms for 444 Docs (0.00675ms/Doc).
2018-11-22 19:51:07 +01:00
andi 6c546bd5b3 update primitiveCollections
The new version comes with an improved removeAll method that is O(n+m)
on sorted lists.
2018-11-21 18:55:54 +01:00
andi cc0157fe0b update java 3rd-party libs 2018-11-20 19:13:59 +01:00
andi 218ea9ed68 use custom date parser
A specialized date parser that can only handle ISO-8601 like dates
(2011-12-03T10:15:30.123Z or 2011-12-03T10:15:30+01:00) but does this
roughly 10 times faster than DateTimeFormatter and 5 times
faster than the FastDateParser of commons-lang3.
2018-11-19 19:23:57 +01:00
andi 6f48a25d53 do not force changes to disk
diskBlock.force() makes insertion speed very slow, because it adds
two digit ms to tree changes. I disabled it for now. The tree is not
crash resistent anyway.
2018-11-19 19:22:27 +01:00
andi afd1e36066 fix unsupported operation exception when adding to an unmodifiable set 2018-11-19 19:19:51 +01:00
andi 135ab42cd8 tags are now stored as variable length byte sequences of longs
Replaced Tags.filenameBytes with a SortedSet<Tag>. Tags are now
stored as longs (variable length encoded) in the PersistenMap.
Tags.filenameBytes was introduced to reduce memory consumption, when
all tags were hold in memory. Tags are now stored in a PersistentMap
and only read when needed.

Moved the VariableByteEncoder into its own project, because it was
needed by pdb-api.
2018-11-17 20:03:46 +01:00
andi b2107acf4e synchronize access to the PerstistentMap
The map is not (yet) thread-safe. Eventually we'll replace the
synchronized blocks with read/write locks on the nodes.
2018-11-17 10:02:29 +01:00
andi fce0f6a04d use PersistentMap in DataStore
Replaces the use of in-memory data structures with the PersistentMap.
This is the crucial step in reducing memory usage for both persistent
storage and main memory.
2018-11-17 09:45:35 +01:00
andi 3ccf526608 PersistentMap now requires only a path instead of a DiskStorage
This makes the PersistentMap easier to use.
2018-11-10 10:08:21 +01:00
andi e90506c1b0 add visitor that find all values by a prefix of the key 2018-11-10 09:48:36 +01:00
andi 807257d330 remove the unused node visitor 2018-11-04 10:44:05 +01:00
andi 008f0db377 add generics to PersistencMap 2018-11-04 10:42:05 +01:00
andi f2d5c27668 insertion of many values into the persistent map 2018-11-04 10:11:10 +01:00
andi c6782df0e5 the root node can have more than two children it it is an inner node
It is not yet possible to split inner nodes or the root node.
2018-10-27 10:17:45 +02:00
andi 8b48b8c3e7 add a pointer to the root node
Before the offset of the root node was hard-coded.
Now the offset of the pointer to the root node is hard-coded.
That allows us to replace the root node.
2018-10-27 08:55:15 +02:00
andi 8bb98deb1e PersistentMap can store data in multiple nodes 2018-10-26 18:35:32 +02:00
andi bb4514c940 insert values into root node 2018-10-14 19:53:02 +02:00
andi 3855d03ead BSFile uses a wrapper for DiskBlock to add BSFile specific stuff
This keeps the DiskBlock class clean, so that it can be used
for PersistentMap.
2018-10-14 17:13:33 +02:00
andi c83b6e11e2 Add first part of a persistent map implementation. 2018-10-14 16:47:17 +02:00
andi bd88c63aff ensure BSFiles use blocks that are aligned to 512 Byte offsets 2018-10-14 09:00:26 +02:00
andi a2520c0238 move method only used in tests to the tests 2018-10-13 20:03:02 +02:00
andi b42fec8fe2 use var keyword 2018-10-13 10:14:52 +02:00
andi b42bb88dff DiskStorage can allocate and free blocks of arbitrary sizes 2018-10-13 10:03:41 +02:00
andi 0539080200 use byte offsets instead of block numbers
We want to allow arbitrary allocations in DiskStorage. The
first step was to change the hard coded block size into a
dynamic one.
2018-10-12 08:10:43 +02:00
andi eaa234bfa5 rename put to putEntries
The method name put is used too often so that eclipse has a
hard time finding references.
2018-10-11 19:25:01 +02:00
andi 979e001efd TcpIngestor can handle csv files 2018-10-11 18:56:16 +02:00